RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 PCDHGA1Q9Y5H4 931 aa24.32■■□□□ 1.48
SDF2L1-201ENST00000248958 C1orf232A0A0U1RR37 186 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 CLDN7O95471 211 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 C1SP09871 688 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 HK3P52790 923 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 FOXC1Q12948 553 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 KLF1Q13351 362 aaPredicted RBP24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 MPP3Q13368 585 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 GALNT3Q14435 633 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 PTPRRQ15256 657 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 RPS6KA1Q15418 735 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 SDR16C5Q8N3Y7 309 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 OR56A4Q8NGH8 313 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 PPP1R2P1Q96PQ5 205 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 TEX101Q9BY14 249 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 EVA1BQ9NVM1 165 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 PKD2L2Q9NZM6 624 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 KLQ9UEF7 1012 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 LRP4O75096 1905 aa24.31■■□□□ 1.48
SDF2L1-201ENST00000248958 GOLGA8CPA6NN73 597 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 TPP1O14773 563 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 KCNN4O15554 427 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 PMPCBO75439 489 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 DKK1O94907 266 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 TNFP01375 233 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 ATXN1LP0C7T5 689 aaKnown RBP24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 MYCLP1P12525 358 aaPredicted RBP24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 SRP54P61011 504 aaKnown RBP24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 CDKN3Q16667 212 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 RAET1GQ6H3X3 334 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 FSTL5Q8N475 847 aaPredicted RBP24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 LMX1AQ8TE12 382 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 AP2M1Q96CW1 435 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 SMIM14Q96QK8 99 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 ABCG8Q9H221 673 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 GBA3Q9H227 469 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 CARD9Q9H257 536 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 ZFYVE1Q9HBF4 777 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 TOR4AQ9NXH8 423 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 DGKBQ9Y6T7 804 aa24.3■■□□□ 1.48
SDF2L1-201ENST00000248958 ARID1BQ8NFD5 2236 aaPredicted RBP24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 LOC285095A0A1B0GVY8 99 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 ANXA9O76027 345 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 CTSEP14091 401 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 CKMT2P17540 419 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 GPR1P46091 355 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 GEMP55040 296 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 WNT3AP56704 352 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 ELOCQ15369 112 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 ALG11Q2TAA5 492 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 PROX2Q3B8N5 592 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 FAM182AQ5T1J6 154 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 KDELC1Q6UW63 502 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 KDELC2Q7Z4H8 507 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 SLCO6A1Q86UG4 719 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 HID1Q8IV36 788 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 RBFAQ8N0V3 343 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 FAM181AQ8N9Y4 354 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 FRMD8P1Q9BZ68 369 aaPredicted RBP24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 USP29Q9HBJ7 922 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 RAD18Q9NS91 495 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 UBP1Q9NZI7 540 aa24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 AAR2Q9Y312 384 aaKnown RBP24.29■■□□□ 1.48
SDF2L1-201ENST00000248958 GOLGA6CA6NDK9 693 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 GOLGA6BA6NDN3 693 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 K7ESM1 405 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 TRIM38O00635 465 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 FFAR2O15552 330 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 SIGLEC6O43699 453 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 GOLGA6DP0CG33 693 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 GIMD1P0DJR0 217 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 SPINT3P49223 89 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 CDK3Q00526 305 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 ILKQ13418 452 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 PRPSAP1Q14558 356 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 PRRT3Q5FWE3 981 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 ANKRD20A2Q5SQ80 823 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 ANKRD20A1Q5TYW2 823 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 ANKRD20A3Q5VUR7 823 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 RAB44Q7Z6P3 723 aaPredicted RBP24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 HEATR4Q86WZ0 1026 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 SPATA13Q96N96 652 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 CDH19Q9H159 772 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 C10orf88Q9H8K7 445 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 GOLGA6AQ9NYA3 693 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 NCKIPSDQ9NZQ3 722 aa24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 PNMA8BQ9ULN7 279 aaPredicted RBP24.28■■□□□ 1.48
SDF2L1-201ENST00000248958 A0A0U1RQS6 177 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 HLA-DPA1P20036 260 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 ACP1P24666 158 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 DUSP3P51452 185 aaPredicted RBP24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 ZCCHC8Q6NZY4 707 aaKnown RBP24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 ADAMTSL4Q6UY14 1074 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 TMC3Q7Z5M5 1100 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 PELI3Q8N2H9 469 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 TSACCQ96A04 125 aaPredicted RBP24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 MRGPRX2Q96LB1 330 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 FAM118BQ9BPY3 351 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 LRRC61Q9BV99 259 aa24.27■■□□□ 1.48
SDF2L1-201ENST00000248958 FSD1LQ9BXM9 530 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms