RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 FUNDC1Q8IVP5 155 aa14.39□□□□□ -0.11
HIF3A-202ENST00000244303 DCP1BQ8IZD4 617 aaKnown RBP14.39□□□□□ -0.11
HIF3A-202ENST00000244303 TTC9BQ8N6N2 239 aa14.39□□□□□ -0.11
HIF3A-202ENST00000244303 FAM81AQ8TBF8 368 aa14.39□□□□□ -0.11
HIF3A-202ENST00000244303 LINC01599Q8WXQ3 324 aa14.39□□□□□ -0.11
HIF3A-202ENST00000244303 SLCO4A1Q96BD0 722 aa14.39□□□□□ -0.11
HIF3A-202ENST00000244303 NMD3Q96D46 503 aaKnown RBP14.39□□□□□ -0.11
HIF3A-202ENST00000244303 SEMA3CQ99985 751 aa14.39□□□□□ -0.11
HIF3A-202ENST00000244303 ZNF696Q9H7X3 374 aa14.39□□□□□ -0.11
HIF3A-202ENST00000244303 TMEM181Q9P2C4 612 aa14.39□□□□□ -0.11
HIF3A-202ENST00000244303 CNOT11Q9UKZ1 510 aaKnown RBP14.39□□□□□ -0.11
HIF3A-202ENST00000244303 CASP8AP2Q9UKL3 1982 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 PPP6CO00743 305 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 RAMP2O60895 175 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 SIX3O95343 332 aaPredicted RBP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 GLP2RO95838 553 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 ATP6V1B1P15313 513 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 FGFR3P22607 806 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 RPL5P46777 297 aaKnown RBP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 FAM189BP81408 668 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 IL10RBQ08334 325 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 TRAP1Q12931 704 aaKnown RBP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 GALNT3Q14435 633 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 UGT3A2Q3SY77 523 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 IL31Q6EBC2 164 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 C8orf82Q6P1X6 216 aaPredicted RBP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 COLGALT2Q8IYK4 626 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 METTL25Q8N6Q8 603 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 PTGR2Q8N8N7 351 aaPredicted RBP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 HHIPL1Q96JK4 782 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 BTN2A3PQ96KV6 586 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 C8orf48Q96LL4 319 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 GLT1D1Q96MS3 346 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 PRPF18Q99633 342 aaKnown RBP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 NDUFA13Q9P0J0 144 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 PTGDR2Q9Y5Y4 395 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 TCRBV3S1A0A5B6 114 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 LRRC14BA6NHZ5 514 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 MUSKO15146 869 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 CD3EAPO15446 510 aaKnown RBP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 OAZ2O95190 189 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 FAM58BPP0C7Q3 252 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 PIRTP0C851 137 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 ACVRL1P37023 503 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 OR1G1P47890 313 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 ATP4BP51164 291 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 SLC7A2P52569 658 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 NME5P56597 212 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 STX1BP61266 288 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 TNK2Q07912 1038 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 OR4D1Q15615 310 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 PITRM1Q5JRX3 1037 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 HERC6Q8IVU3 1022 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 CLYBLQ8N0X4 340 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 OR13C4Q8NGS5 318 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 FUBP3Q96I24 572 aaKnown RBP eCLIP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 RPRD1AQ96P16 312 aaPredicted RBP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 MRPS26Q9BYN8 205 aaKnown RBP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 COQ10BQ9H8M1 238 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 AKTIPQ9H8T0 292 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 GMPR2Q9P2T1 348 aaKnown RBP14.38□□□□□ -0.11
HIF3A-202ENST00000244303 GIMAP2Q9UG22 337 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 DNAJC15Q9Y5T4 150 aa14.38□□□□□ -0.11
HIF3A-202ENST00000244303 THSD7BQ9C0I4 1608 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 CCDC162PA2VCL2 907 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 C7orf72A4D263 438 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 UBXN8O00124 270 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 AOC2O75106 756 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 SOAT2O75908 522 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 ZNF37AP17032 561 aaPredicted RBP14.37□□□□□ -0.11
HIF3A-202ENST00000244303 GPX3P22352 226 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 ACADVLP49748 655 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 FOXA1P55317 472 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 ACVR1Q04771 509 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 SERINC3Q13530 473 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 GEN1Q17RS7 908 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 KIF19Q2TAC6 998 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 NADK2Q4G0N4 442 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 SAMD4BQ5PRF9 694 aaKnown RBP14.37□□□□□ -0.11
HIF3A-202ENST00000244303 RBM44Q6ZP01 1051 aaKnown RBP14.37□□□□□ -0.11
HIF3A-202ENST00000244303 MYEOVQ96EZ4 313 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 HIC2Q96JB3 615 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 SLC2A11Q9BYW1 496 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 GRIP2Q9C0E4 1043 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 POLR1EQ9GZS1 481 aaKnown RBP14.37□□□□□ -0.11
HIF3A-202ENST00000244303 SRRDQ9UH36 339 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 PRG3Q9Y2Y8 225 aaPredicted RBP14.37□□□□□ -0.11
HIF3A-202ENST00000244303 SNX13Q9Y5W8 968 aa14.37□□□□□ -0.11
HIF3A-202ENST00000244303 CCDC160A6NGH7 325 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 TMEM189-UBE2V1I3L0A0 370 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 CDK14O94921 469 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 OR1E1P30953 314 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 TRIP4Q15650 581 aaPredicted RBP14.36□□□□□ -0.11
HIF3A-202ENST00000244303 NFE2Q16621 373 aaPredicted RBP14.36□□□□□ -0.11
HIF3A-202ENST00000244303 PFKFB4Q16877 469 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 MTX3Q5HYI7 312 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 MRNIPQ6NTE8 343 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 HACD2Q6Y1H2 254 aa14.36□□□□□ -0.11
HIF3A-202ENST00000244303 RETREG3Q86VR2 466 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms