RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 HOXA6P31267 233 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 GPX6P59796 221 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 ARHGEF7Q14155 803 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 TBC1D3GQ6DHY5 549 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 TBC1D3CQ6IPX1 549 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 TBC1D3Q8IZP1 549 aaPredicted RBP20.12■□□□□ 0.81
SNRPA-201ENST00000243563 DEFB119Q8N690 84 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 CXorf40AQ8TE69 158 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 ZNF669Q96BR6 464 aaPredicted RBP20.12■□□□□ 0.81
SNRPA-201ENST00000243563 GPR174Q9BXC1 333 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 PHACTR1Q9C0D0 580 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 CDC42EP4Q9H3Q1 356 aaKnown RBP20.12■□□□□ 0.81
SNRPA-201ENST00000243563 SEMA4AQ9H3S1 761 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 EBF2Q9HAK2 575 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 NINJ2Q9NZG7 142 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 FKBPLQ9UIM3 349 aa20.12■□□□□ 0.81
SNRPA-201ENST00000243563 FNDC3AQ9Y2H6 1198 aaKnown RBP20.12■□□□□ 0.81
SNRPA-201ENST00000243563 TNRC6BQ9UPQ9 1833 aaKnown RBP20.11■□□□□ 0.81
SNRPA-201ENST00000243563 ZCWPW2A0A1B0GU75 182 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 FAM237BA0A1B0GVD1 139 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 CRTAMO95727 393 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 PRSS56P0CW18 603 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 ZNF30P17039 623 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 SSTR1P30872 391 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 ACOX1Q15067 660 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 ANKRD20A4Q4UJ75 823 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 TMEM135Q86UB9 458 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 OR2T34Q8NGX1 318 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 SCAMP4Q969E2 229 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 TBATAQ96M53 351 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 SGK2Q9HBY8 427 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 MRM3Q9HC36 420 aaKnown RBP20.11■□□□□ 0.81
SNRPA-201ENST00000243563 NLE1Q9NVX2 485 aaPredicted RBP20.11■□□□□ 0.81
SNRPA-201ENST00000243563 SAMD15Q9P1V8 674 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 ZC3H7BQ9UGR2 993 aaKnown RBP20.11■□□□□ 0.81
SNRPA-201ENST00000243563 RPS6KL1Q9Y6S9 549 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 WDFY4Q6ZS81 3184 aa20.11■□□□□ 0.81
SNRPA-201ENST00000243563 THADAQ6YHU6 1953 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 C2orf81A6NN90 581 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 H0Y858 1186 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 ZNF217O75362 1048 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 RECQL5O94762 991 aaPredicted RBP20.1■□□□□ 0.81
SNRPA-201ENST00000243563 F7P08709 466 aaPredicted RBP20.1■□□□□ 0.81
SNRPA-201ENST00000243563 PGAM1P18669 254 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 PSMA3P25788 255 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 SPINT3P49223 89 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 ACVR1Q04771 509 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 CRYMQ14894 314 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 KYNUQ16719 465 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 ZNF284Q2VY69 593 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 ALS2CLQ60I27 953 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 STEAP4Q687X5 459 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 TRMT10BQ6PF06 316 aaKnown RBP20.1■□□□□ 0.81
SNRPA-201ENST00000243563 LRRC39Q96DD0 335 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 AGAP2Q99490 1192 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 EPB41L4BQ9H329 900 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 PREBQ9HCU5 417 aa20.1■□□□□ 0.81
SNRPA-201ENST00000243563 RAD51BO15315 384 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 STX7O15400 261 aaKnown RBP20.09■□□□□ 0.81
SNRPA-201ENST00000243563 PIAS1O75925 651 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 IGHV4-34P06331 123 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 XIAPP98170 497 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 CCDC15Q0P6D6 951 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 PEX6Q13608 980 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 WDR5BQ86VZ2 330 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 HORMAD1Q86X24 394 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 RELL1Q8IUW5 271 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 PYROXD1Q8WU10 500 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 STYXQ8WUJ0 223 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 PTCD2Q8WV60 388 aaKnown RBP20.09■□□□□ 0.81
SNRPA-201ENST00000243563 DTD2Q96FN9 168 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 ABCG8Q9H221 673 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 LRRC4CQ9HCJ2 640 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 FZD3Q9NPG1 666 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 SLCO1B1Q9Y6L6 691 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 CCDC162PA2VCL2 907 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 PRR33A8MZF0 331 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 GOLGA8KD6RF30 607 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 GOLGA8TH3BQL2 631 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 K7ESM1 405 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 OXTRP30559 389 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 CREB5Q02930 508 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 SFSWAPQ12872 951 aaKnown RBP20.09■□□□□ 0.81
SNRPA-201ENST00000243563 HDAC10Q969S8 669 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 FUBP1Q96AE4 644 aaKnown RBP20.09■□□□□ 0.81
SNRPA-201ENST00000243563 CDKN2AIPNLQ96HQ2 116 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 SRPK1Q96SB4 655 aaKnown RBP20.09■□□□□ 0.81
SNRPA-201ENST00000243563 C1QTNF2Q9BXJ5 285 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 KDM4CQ9H3R0 1056 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 IL26Q9NPH9 171 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 SLC17A6Q9P2U8 582 aa20.09■□□□□ 0.81
SNRPA-201ENST00000243563 UQCRHLA0A096LP55 91 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 PSMD11O00231 422 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 LZTS3O60299 673 aaPredicted RBP20.08■□□□□ 0.8
SNRPA-201ENST00000243563 TM7SF2O76062 418 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 USP1O94782 785 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 PAK4O96013 591 aaPredicted RBP20.08■□□□□ 0.8
SNRPA-201ENST00000243563 UQCRHP07919 91 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 NFKBIAP25963 317 aa20.08■□□□□ 0.8
SNRPA-201ENST00000243563 ARCN1P48444 511 aaKnown RBP20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms