RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 MIPP30301 263 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 CDC25CP30307 473 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 SLC6A9P48067 706 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 PRKG2Q13237 762 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 UBE2R2Q712K3 238 aaPredicted RBP13.21□□□□□ -0.29
NEK9-201ENST00000238616 GGA2Q9UJY4 613 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 UMODL1Q5DID0 1318 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 SLC6A3Q01959 620 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 IL18R1Q13478 541 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 NAT14Q8WUY8 206 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 PIK3R3Q92569 461 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 TSPAN1O60635 241 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 PIAS1O75925 651 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 ADARP55265 1226 aaKnown RBP13.21□□□□□ -0.29
NEK9-201ENST00000238616 NRG1Q02297 640 aaPredicted RBP13.21□□□□□ -0.29
NEK9-201ENST00000238616 DUSP4Q13115 394 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 ARHGEF19Q8IW93 802 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 COQ8BQ96D53 544 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 SEMA3GQ9NS98 782 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 TMLHEQ9NVH6 421 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 GRIP1Q9Y3R0 1128 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 CCNYL2Q5T2Q4 361 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 FBXO25Q8TCJ0 367 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 PPCDCQ96CD2 204 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 APOPT1Q96IL0 206 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 ASB2Q96Q27 587 aa13.21□□□□□ -0.29
NEK9-201ENST00000238616 AKAP8O43823 692 aaKnown RBP13.21□□□□□ -0.3
NEK9-201ENST00000238616 CCZ1BP86790 482 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 CCZ1P86791 482 aaPredicted RBP13.21□□□□□ -0.3
NEK9-201ENST00000238616 CARTPTQ16568 116 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 HSDL1Q3SXM5 330 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 FAM131AQ6UXB0 335 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 FBXO33Q7Z6M2 555 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 GHDCQ8N2G8 530 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 HCAR2Q8TDS4 363 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 NRP2O60462 931 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 CCNDBP1O95273 360 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 CCNOP22674 350 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 GABRR2P28476 465 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 IL12AP29459 219 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 OC90Q02509 493 aaPredicted RBP13.21□□□□□ -0.3
NEK9-201ENST00000238616 FSTL1Q12841 308 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 UBAP2LQ14157 1087 aaKnown RBP13.21□□□□□ -0.3
NEK9-201ENST00000238616 ZCCHC10Q8TBK6 192 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 ABCB9Q9NP78 766 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 PNO1Q9NRX1 252 aaKnown RBP13.21□□□□□ -0.3
NEK9-201ENST00000238616 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.21□□□□□ -0.3
NEK9-201ENST00000238616 TMCO1Q9UM00 188 aa13.21□□□□□ -0.3
NEK9-201ENST00000238616 RBL1P28749 1068 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 SMIM11AP58511 58 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 PPP3R1P63098 170 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 ALG1LQ6GMV1 187 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 LZTR1Q8N653 840 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 C12orf29Q8N999 325 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 C11orf24Q96F05 449 aaPredicted RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 TMBIM4Q9HC24 238 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 ABCA8O94911 1581 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 KERAO60938 352 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 CSH1P0DML2 217 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 CSH2P0DML3 217 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 GJA1P17302 382 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 ZNF75CPQ92670 426 aaPredicted RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 CRNNQ9UBG3 495 aaPredicted RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 PACSIN3Q9UKS6 424 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 FAM86C2PA6NEL3 165 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 FGF10O15520 208 aaPredicted RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 AKAP3O75969 853 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 ECHS1P30084 290 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 AP2S1P53680 142 aaPredicted RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 ZNF571Q7Z3V5 609 aaPredicted RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 SETD7Q8WTS6 366 aaKnown RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 MTMR8Q96EF0 704 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 C1GALT1C1Q96EU7 318 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 CITED4Q96RK1 184 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 SEMA3CQ99985 751 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 PEX14O75381 377 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 SNRPB2P08579 225 aaKnown RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 GRB10Q13322 594 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 WDR59Q6PJI9 974 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 PSTKQ8IV42 348 aaKnown RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 ABRAQ8N0Z2 381 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 NETO2Q8NC67 525 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 NKX2-3Q8TAU0 364 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 CYP2W1Q8TAV3 490 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 ABHD5Q8WTS1 349 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 TNFAIP8L1Q8WVP5 186 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 NPEPPSL1A6NEC2 478 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 H3BSH0 61 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 GNB5O14775 395 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 SIN3BO75182 1162 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 IL33O95760 270 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 ITPKAP23677 461 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 RPL3P39023 403 aaKnown RBP13.2□□□□□ -0.3
NEK9-201ENST00000238616 GJA8P48165 433 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 FAAP100Q0VG06 881 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 BNIP1Q12981 228 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 SQLEQ14534 574 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 TEAD4Q15561 434 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 NOMO2Q5JPE7 1267 aa13.2□□□□□ -0.3
NEK9-201ENST00000238616 SPESP1Q6UW49 350 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms