RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 COL4A4P53420 1690 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 FAM237BA0A1B0GVD1 139 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 IGLON5A6NGN9 336 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 MT-ND3P03897 115 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 TTPAP49638 278 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 ANKRD20A4Q4UJ75 823 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 FNBP1LQ5T0N5 605 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 KIAA1211LQ6NV74 962 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 RANBP10Q6VN20 620 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 Q6ZVL8 140 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 TRAPPC5Q8IUR0 188 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 EIF1ADQ8N9N8 165 aaKnown RBP11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 FRS2Q8WU20 508 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 SERAC1Q96JX3 654 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 GABRG3Q99928 467 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 FKBPLQ9UIM3 349 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 SOX13Q9UN79 622 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 SLC7A4O43246 635 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 RECQL5O94762 991 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 RHOBTB1O94844 696 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 OR56A5P0C7T3 313 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 P2RY2P41231 377 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 RNF187Q5TA31 235 aaPredicted RBP11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 HORMAD1Q86X24 394 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 ELMO2Q96JJ3 720 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 SCYL1Q96KG9 808 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 HDAC8Q9BY41 377 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 COQ6Q9Y2Z9 468 aa11.12□□□□□ -0.63
TNFAIP3-201ENST00000237289 TRIM16O95361 564 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 PDAP1Q13442 181 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 TMEM31Q5JXX7 168 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 IER5LQ5T953 404 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 ESRP1Q6NXG1 681 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 CNPY4Q8N129 248 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 HEXDCQ8WVB3 486 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 MFSD3Q96ES6 412 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 RIOK2Q9BVS4 552 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 OSGEPL1Q9H4B0 414 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 FAM96AQ9H5X1 160 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 ITM2BQ9Y287 266 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 NCOR1O75376 2440 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 PATJQ8NI35 1801 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 ERVK-10P10266 1014 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 PBLDP30039 288 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 TPMTP51580 245 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 UGT3A1Q6NUS8 523 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 STRA8Q7Z7C7 330 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 PHYKPLQ8IUZ5 450 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 OR13C4Q8NGS5 318 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 TSPAN17Q96FV3 270 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 CERS2Q96G23 380 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 C1QTNF1Q9BXJ1 281 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 SLC17A9Q9BYT1 436 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 PREBQ9HCU5 417 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 ZNHIT2Q9UHR6 403 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 TNFRSF10AO00220 468 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 CCL22O00626 93 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 CD3EAPO15446 510 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 SUN1O94901 812 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 CFIP05156 583 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 C6P13671 934 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 AOC1P19801 751 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 CR2P20023 1033 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 SERPINB9P50453 376 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 VASPP50552 380 aaPredicted RBP11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 CACNG1Q06432 222 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 SLC29A2Q14542 456 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 USP10Q14694 798 aaKnown RBP11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 TTLL9Q3SXZ7 439 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 LMNTD2Q8IXW0 634 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 FOPNLQ96NB1 174 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 FAM129BQ96TA1 746 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 ZSCAN5AQ9BUG6 496 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 SEMA4AQ9H3S1 761 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 WDR26Q9H7D7 661 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 FZD4Q9ULV1 537 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 PLAAQ9Y263 795 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 GON4LQ3T8J9 2241 aa11.11□□□□□ -0.63
TNFAIP3-201ENST00000237289 USP1O94782 785 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 TYK2P29597 1187 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 CRYMQ14894 314 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 C1orf210Q8IVY1 113 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 PAIP2Q9BPZ3 127 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 GRHL1Q9NZI5 618 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 SARDHQ9UL12 918 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 LOC285095A0A1B0GVY8 99 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 CHURC1-FNTBB4DL54 471 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 VPS26AO75436 327 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 CDK14O94921 469 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 PEX11BO96011 259 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 NMBRP28336 390 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 ETV3P41162 512 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 RPS9P46781 194 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 CD151P48509 253 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 FNTBP49356 437 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 KPNA2P52292 529 aaKnown RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 TSTA3Q13630 321 aaPredicted RBP11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 KLC3Q6P597 504 aa11.1□□□□□ -0.63
TNFAIP3-201ENST00000237289 CRTC1Q6UUV9 634 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms