RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 ANO7Q6IWH7 933 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 METTL3Q86U44 580 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 ASB9Q96DX5 294 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 KAZALD1Q96I82 304 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 PREBQ9HCU5 417 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 TMX2Q9Y320 296 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 FAM86C2PA6NEL3 165 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 CHP2O43745 196 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 C10orf82Q8WW14 230 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 ACOT12Q8WYK0 555 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.22□□□□□ -1.094e-34■■■□□ 18.6
APOB-201ENST00000233242 ZNF423Q2M1K9 1284 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 FAM20CQ8IXL6 584 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 OR8H3Q8N146 312 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 EFCAB3Q8N7B9 438 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 EARS2Q5JPH6 523 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 GLYATQ6IB77 296 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 ANKS1BQ7Z6G8 1248 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 ZNF655Q8N720 491 aaPredicted RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 MECRQ9BV79 373 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 DCDC2CA8MYV0 355 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 FABP3P05413 133 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 GNPDA1P46926 289 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 RNASEH2BQ5TBB1 312 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 GPRC5AQ8NFJ5 357 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 CLHC1Q8NHS4 586 aa8.22□□□□□ -1.09
APOB-201ENST00000233242 SNIP1Q8TAD8 396 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 NUSAP1Q9BXS6 441 aaKnown RBP8.22□□□□□ -1.09
APOB-201ENST00000233242 CALCAP01258 141 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 LCP2Q13094 533 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 AMHR2Q16671 573 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 NADK2Q4G0N4 442 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 LLGL2Q6P1M3 1020 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 SMG8Q8ND04 991 aaKnown RBP8.21□□□□□ -1.09
APOB-201ENST00000233242 CCDC177Q9NQR7 707 aaPredicted RBP8.21□□□□□ -1.09
APOB-201ENST00000233242 GMIPQ9P107 970 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 JCADQ9P266 1359 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 C17orf102A2RUQ5 167 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 NPHS1O60500 1241 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 NELFEP18615 380 aaKnown RBP8.21□□□□□ -1.09
APOB-201ENST00000233242 RPS12P25398 132 aaKnown RBP8.21□□□□□ -1.09
APOB-201ENST00000233242 NOMO1Q15155 1222 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 PABPC1LQ4VXU2 614 aaKnown RBP8.21□□□□□ -1.09
APOB-201ENST00000233242 PLEKHG4Q58EX7 1191 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 CCDC28AQ8IWP9 274 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 DEFB106AQ8N104 65 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 SLC34A3Q8N130 599 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 C15orf40Q8WUR7 153 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 TNFAIP8L1Q8WVP5 186 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 EIF2B3Q9NR50 452 aaKnown RBP8.21□□□□□ -1.09
APOB-201ENST00000233242 SUCOQ9UBS9 1254 aaKnown RBP8.21□□□□□ -1.09
APOB-201ENST00000233242 OR12D3Q9UGF7 316 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 EGFL7Q9UHF1 273 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 ELOVL7A1L3X0 281 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 APOC1P02654 83 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 LIPEQ05469 1076 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 STARD3Q14849 445 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 ARMC12Q5T9G4 340 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 ZC3H7AQ8IWR0 971 aaKnown RBP8.21□□□□□ -1.09
APOB-201ENST00000233242 CSGALNACT1Q8TDX6 532 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 PDP1Q9P0J1 537 aaPredicted RBP8.21□□□□□ -1.09
APOB-201ENST00000233242 PLCL2Q9UPR0 1127 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 ILVBLA1L0T0 632 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 FAM86B1E9PN63 330 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 ENO2P09104 434 aaPredicted RBP8.21□□□□□ -1.09
APOB-201ENST00000233242 CPTPQ5TA50 214 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 MRPS31Q92665 395 aaKnown RBP8.21□□□□□ -1.09
APOB-201ENST00000233242 ZFYVE1Q9HBF4 777 aa8.21□□□□□ -1.09
APOB-201ENST00000233242 PLIN3O60664 434 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 PRAMEF1O95521 474 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 FGRP09769 529 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 SLC6A4P31645 630 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 ALDH3A2P51648 485 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 GK5Q6ZS86 529 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 CCDC3Q9BQI4 270 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 C9P02748 559 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 RFX3P48380 749 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 PITPNAQ00169 270 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 IRF2BP1Q8IU81 584 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 PLEKHO2Q8TD55 490 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 HMGXB4Q9UGU5 601 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 PABPC4LP0CB38 370 aaKnown RBP8.21□□□□□ -1.1
APOB-201ENST00000233242 MPSTP25325 297 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 HTR7P34969 479 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 RPL19P84098 196 aaKnown RBP8.21□□□□□ -1.1
APOB-201ENST00000233242 MTAPQ13126 283 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 GLB1L3Q8NCI6 653 aaPredicted RBP8.21□□□□□ -1.1
APOB-201ENST00000233242 AGBL3Q8NEM8 1001 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 CRELD1Q96HD1 420 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 GCATO75600 419 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 TLX1P31314 330 aaPredicted RBP8.21□□□□□ -1.1
APOB-201ENST00000233242 VWA5B1Q5TIE3 1220 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 RPTNQ6XPR3 784 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 LENG8Q96PV6 779 aaPredicted RBP8.21□□□□□ -1.1
APOB-201ENST00000233242 TRIM2Q9C040 744 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 AP2A2O94973 939 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 IDH3AP50213 366 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 GNG2P59768 71 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 NOMO3P69849 1222 aa8.21□□□□□ -1.1
APOB-201ENST00000233242 RALGDSQ12967 914 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms