RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 RAVER1Q8IY67 606 aaKnown RBP9.98□□□□□ -0.81
USP11-201ENST00000218348 CMTR2Q8IYT2 770 aaKnown RBP9.98□□□□□ -0.81
USP11-201ENST00000218348 MYLIPQ8WY64 445 aa9.98□□□□□ -0.81
USP11-201ENST00000218348 STMN2Q93045 179 aa9.98□□□□□ -0.81
USP11-201ENST00000218348 SLC45A3Q96JT2 553 aa9.98□□□□□ -0.81
USP11-201ENST00000218348 C1orf74Q96LT6 269 aa9.98□□□□□ -0.81
USP11-201ENST00000218348 SIKE1Q9BRV8 207 aa9.98□□□□□ -0.81
USP11-201ENST00000218348 ZBED2Q9BTP6 218 aa9.98□□□□□ -0.81
USP11-201ENST00000218348 CINPQ9BW66 212 aaPredicted RBP9.98□□□□□ -0.81
USP11-201ENST00000218348 CCDC106Q9BWC9 280 aa9.98□□□□□ -0.81
USP11-201ENST00000218348 POLR1EQ9GZS1 481 aaKnown RBP9.98□□□□□ -0.81
USP11-201ENST00000218348 ILKAPQ9H0C8 392 aaPredicted RBP9.98□□□□□ -0.81
USP11-201ENST00000218348 TNFRSF12AQ9NP84 129 aa9.98□□□□□ -0.81
USP11-201ENST00000218348 ASB3Q9Y575 518 aa9.98□□□□□ -0.81
USP11-201ENST00000218348 OBSL1O75147 1896 aa9.98□□□□□ -0.81
USP11-201ENST00000218348 ZNF840PA6NDX5 716 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 PPP6CO00743 305 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 PSMD3O43242 534 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 TBC1D4O60343 1298 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 SIX3O95343 332 aaPredicted RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 TFEBP19484 476 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 CCND1P24385 295 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 VARSP26640 1264 aaKnown RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 MZF1P28698 734 aaPredicted RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 GSTT1P30711 240 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 FMO4P31512 558 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 ARL1P40616 181 aaPredicted RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 SLC11A2P49281 568 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 ZNF135P52742 658 aaPredicted RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 NDST2P52849 883 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 SMAD3P84022 425 aaKnown RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 SEMA3AQ14563 771 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 CLEC6AQ6EIG7 209 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 TMEM214Q6NUQ4 689 aaKnown RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 HERC6Q8IVU3 1022 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 OR4K2Q8NGD2 314 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 ERLEC1Q96DZ1 483 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 PRICKLE1Q96MT3 831 aaPredicted RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 C1QTNF1Q9BXJ1 281 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 NDEL1Q9GZM8 345 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 CDH19Q9H159 772 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 RNPEPL1Q9HAU8 725 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 TRPV5Q9NQA5 729 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 OXSMQ9NWU1 459 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 CLIC5Q9NZA1 410 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 GIMAP2Q9UG22 337 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 FCF1Q9Y324 198 aaKnown RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 SH3GLB1Q9Y371 365 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 ZBBXA8MT70 800 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 CAPN14A8MX76 684 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 C5orf67F2Z3F1 127 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 H0Y626 953 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 SUPT7LO94864 414 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 LUC7L3O95232 432 aaKnown RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 SERPINA6P08185 405 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 ITGB6P18564 788 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 SOX11P35716 441 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 MAGEA11P43364 429 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 NAB1Q13506 487 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 TUBB3Q13509 450 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 HECTD2Q5U5R9 776 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 FRMD7Q6ZUT3 714 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 DEFB107AQ8IZN7 70 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 SCML4Q8N228 414 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 ANKK1Q8NFD2 765 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 LENG8Q96PV6 779 aaPredicted RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 TCF7L2Q9NQB0 619 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 TREX1Q9NSU2 369 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 TRPM5Q9NZQ8 1165 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 PCDHB12Q9Y5F1 795 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 PTGDR2Q9Y5Y4 395 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 MYLKQ15746 1914 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 MAGEA13PA6NCF6 341 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 H7C4K7 107 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 STC2O76061 302 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 C1RP00736 705 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 SERPINF2P08697 491 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 ZNF177Q13360 481 aaPredicted RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 KRT72Q14CN4 511 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 CLPPQ16740 277 aaPredicted RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 UGP2Q16851 508 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 STXBP5Q5T5C0 1151 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 FOXB2Q5VYV0 432 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 AFMIDQ63HM1 303 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 GRAMD4Q6IC98 578 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 TMEM207Q6UWW9 146 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 TRIM67Q6ZTA4 783 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 CLEC14AQ86T13 490 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 LRRC43Q8N309 656 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 PYDC1Q8WXC3 89 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 USP13Q92995 863 aaPredicted RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 IGSF21Q96ID5 467 aa9.97□□□□□ -0.81
USP11-201ENST00000218348 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 YBX2Q9Y2T7 364 aaKnown RBP9.97□□□□□ -0.81
USP11-201ENST00000218348 GOLGA4Q13439 2230 aaKnown RBP9.96□□□□□ -0.81
USP11-201ENST00000218348 IQCF5A8MTL0 148 aa9.96□□□□□ -0.81
USP11-201ENST00000218348 LIN7AO14910 233 aaPredicted RBP9.96□□□□□ -0.81
USP11-201ENST00000218348 CACNG3O60359 315 aa9.96□□□□□ -0.81
USP11-201ENST00000218348 TBL1XO60907 577 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms