RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 TADA1Q96BN2 335 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 P2RY11Q96G91 374 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 SNX6Q9UNH7 406 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 TLR6Q9Y2C9 796 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 DNALI1O14645 258 aaPredicted RBP13.74□□□□□ -0.21
SIX4-201ENST00000216513 MFSD11O43934 449 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 RBMS1P29558 406 aaKnown RBP13.74□□□□□ -0.21
SIX4-201ENST00000216513 TBX2Q13207 712 aaPredicted RBP13.74□□□□□ -0.21
SIX4-201ENST00000216513 KHDRBS2Q5VWX1 349 aaKnown RBP13.74□□□□□ -0.21
SIX4-201ENST00000216513 ZNF621Q6ZSS3 439 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.74□□□□□ -0.21
SIX4-201ENST00000216513 TMBIM4Q9HC24 238 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 PEX12O00623 359 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 PEX1O43933 1283 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 CNPP09543 421 aaKnown RBP13.74□□□□□ -0.21
SIX4-201ENST00000216513 SSR2P43308 183 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 POMZP3Q6PJE2 187 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 SH3RF1Q7Z6J0 888 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 TMPRSS11BQ86T26 416 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 FIG4Q92562 907 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 GAL3ST4Q96RP7 486 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 A0A087X1B8 175 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 IRAK2O43187 625 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 SCN2BO60939 215 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 UBOX5O94941 541 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 C16orf89Q6UX73 402 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 PLD3Q8IV08 490 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 ADGRG2Q8IZP9 1017 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 ATP6V1C2Q8NEY4 427 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 STAG3L4Q8TBR4 150 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 CSPG4P5Q96PW8 444 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 TBCDQ9BTW9 1192 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 BRINP2Q9C0B6 783 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 PCDH12Q9NPG4 1184 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 SLC25A12O75746 678 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 CBX6O95503 412 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 BMP6P22004 513 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 UNC5AQ6ZN44 842 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 RIPOR1Q6ZS17 1223 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 NACC2Q96BF6 587 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 SUSD2Q9UGT4 822 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 SQORQ9Y6N5 450 aa13.74□□□□□ -0.21
SIX4-201ENST00000216513 C2orf71A6NGG8 1288 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 DUSP3P51452 185 aaPredicted RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 TAF13Q15543 124 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 RNF31Q96EP0 1072 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 TMEM209Q96SK2 561 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 SUCOQ9UBS9 1254 aaKnown RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 LTBP4Q8N2S1 1624 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 IFNA14P01570 189 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 ASPAP45381 313 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 FAAP100Q0VG06 881 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 MAD2L1Q13257 205 aaPredicted RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 GPAT3Q53EU6 434 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 CAPN13Q6MZZ7 669 aaPredicted RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 TCP10LQ8TDR4 215 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 FAM120BQ96EK7 910 aaKnown RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 PABPC3Q9H361 631 aaKnown RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 PIPSLA2A3N6 862 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 WNT9AO14904 365 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 DHX15O43143 795 aaKnown RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 VPS4BO75351 444 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 MATN4O95460 622 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 PRLRP16471 622 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 COPAP53621 1224 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 TRPC4APQ8TEL6 797 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 TFAP2BQ92481 460 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 GDF3Q9NR23 364 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 HCN3Q9P1Z3 774 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 TNPO3Q9Y5L0 923 aaKnown RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 KLK3P07288 261 aaPredicted RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 CDH2P19022 906 aaPredicted RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 AGKQ53H12 422 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 OTUD3Q5T2D3 398 aaPredicted RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 AGBL2Q5U5Z8 902 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 RTL3Q8N8U3 475 aaKnown RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 MAFAQ8NHW3 353 aaPredicted RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 ROPN1BQ9BZX4 212 aaPredicted RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 ROPN1Q9HAT0 212 aaPredicted RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 NOD2Q9HC29 1040 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 KRT84Q9NSB2 600 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 HIST1H2ABP04908 130 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 TFPIP10646 304 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 HNRNPH1P31943 449 aaKnown RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 AVPR1BP47901 424 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 ATXN1P54253 815 aaKnown RBP13.73□□□□□ -0.21
SIX4-201ENST00000216513 TAS2R40P59535 323 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 TAS2R50P59544 299 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 PLGLB1Q02325 96 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 TRAF2Q12933 501 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 HIST3H2AQ7L7L0 130 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 HIST1H2ACQ93077 130 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 CCT7Q99832 543 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 GSDMCQ9BYG8 508 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 ZC4H2Q9NQZ6 224 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 FTSJ1Q9UET6 329 aa13.73□□□□□ -0.21
SIX4-201ENST00000216513 A6NCN8 305 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 SNAP91O60641 907 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 NDST3O95803 873 aa13.72□□□□□ -0.21
SIX4-201ENST00000216513 ADH1BP00325 375 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms