RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 HLTFQ14527 1009 aaKnown RBP eCLIP22.1■■□□□ 1.13
VTI1B-201ENST00000216456 PAFAH1B3Q15102 231 aaKnown RBP22.1■■□□□ 1.13
VTI1B-201ENST00000216456 CERCAMQ5T4B2 595 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 LRRC66Q68CR7 880 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 RAET1GQ6H3X3 334 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 TECPR1Q7Z6L1 1165 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 CCNJLQ8IV13 435 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 BBS5Q8N3I7 341 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 KCTD6Q8NC69 237 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 SLC39A7Q92504 469 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 RAPGEF5Q92565 580 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 SCAMP4Q969E2 229 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 FRMD8Q9BZ67 464 aaPredicted RBP22.1■■□□□ 1.13
VTI1B-201ENST00000216456 RCOR3Q9P2K3 495 aaPredicted RBP22.1■■□□□ 1.13
VTI1B-201ENST00000216456 LRIT1Q9P2V4 623 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 SUFUQ9UMX1 484 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 CHKBQ9Y259 395 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 TMEM98Q9Y2Y6 226 aa22.1■■□□□ 1.13
VTI1B-201ENST00000216456 HLA-DQB2P05538 268 aa22.09■■□□□ 1.13
VTI1B-201ENST00000216456 CYP2A6P11509 494 aaPredicted RBP22.09■■□□□ 1.13
VTI1B-201ENST00000216456 KELP23276 732 aa22.09■■□□□ 1.13
VTI1B-201ENST00000216456 SKOR1P84550 965 aa22.09■■□□□ 1.13
VTI1B-201ENST00000216456 HADHQ16836 314 aaKnown RBP22.09■■□□□ 1.13
VTI1B-201ENST00000216456 ASTE1Q2TB18 679 aaPredicted RBP22.09■■□□□ 1.13
VTI1B-201ENST00000216456 C14orf28Q4W4Y0 310 aa22.09■■□□□ 1.13
VTI1B-201ENST00000216456 IGF2-ASQ6U949 168 aa22.09■■□□□ 1.13
VTI1B-201ENST00000216456 ARRDC2Q8TBH0 407 aa22.09■■□□□ 1.13
VTI1B-201ENST00000216456 MAML1Q92585 1016 aa22.09■■□□□ 1.13
VTI1B-201ENST00000216456 ABCG8Q9H221 673 aa22.09■■□□□ 1.13
VTI1B-201ENST00000216456 PHPT1Q9NRX4 125 aaPredicted RBP22.09■■□□□ 1.13
VTI1B-201ENST00000216456 RBM22Q9NW64 420 aaKnown RBP eCLIP22.09■■□□□ 1.13
VTI1B-201ENST00000216456 EIF4E1BA6NMX2 242 aaKnown RBP22.08■■□□□ 1.13
VTI1B-201ENST00000216456 PRLP01236 227 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 FGF1P05230 155 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 CCNB1P14635 433 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 HNRNPH3P31942 346 aaKnown RBP22.08■■□□□ 1.13
VTI1B-201ENST00000216456 UGT1A5P35504 534 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 INHBCP55103 352 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 PTSQ03393 145 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 SRSF6Q13247 344 aaKnown RBP22.08■■□□□ 1.13
VTI1B-201ENST00000216456 ARHGEF7Q14155 803 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 SLC30A9Q6PML9 568 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 USP45Q70EL2 814 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 B4GALNT4Q76KP1 1039 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 SPRED1Q7Z699 444 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 GPBAR1Q8TDU6 330 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 CHP1Q99653 195 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 WDR70Q9NW82 654 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 PPIL1Q9Y3C6 166 aa22.08■■□□□ 1.13
VTI1B-201ENST00000216456 PCYT1BQ9Y5K3 369 aaPredicted RBP22.08■■□□□ 1.13
VTI1B-201ENST00000216456 A0A1W2PQ67 120 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 PLD2O14939 933 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 MATN3O15232 486 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 ATXN7O15265 892 aaPredicted RBP22.07■■□□□ 1.12
VTI1B-201ENST00000216456 B4GAT1O43505 415 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 GLB1P16278 677 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 ITIH1P19827 911 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 OR1D5P58170 312 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 MESDQ14696 234 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 SLC18A3Q16572 532 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 MARK2Q7KZI7 788 aaKnown RBP22.07■■□□□ 1.12
VTI1B-201ENST00000216456 RAB11FIP2Q7L804 512 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 FBXO39Q8N4B4 442 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 WDR48Q8TAF3 677 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 GRAMD1AQ96CP6 724 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 FAF2Q96CS3 445 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 LIN37Q96GY3 246 aaPredicted RBP22.07■■□□□ 1.12
VTI1B-201ENST00000216456 ZNF670Q9BS34 389 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 POLR1EQ9GZS1 481 aaKnown RBP22.07■■□□□ 1.12
VTI1B-201ENST00000216456 RDH14Q9HBH5 336 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 SPTLC3Q9NUV7 552 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 TAAR2Q9P1P5 351 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 APPL1Q9UKG1 709 aa22.07■■□□□ 1.12
VTI1B-201ENST00000216456 ARHGEF17Q96PE2 2063 aaPredicted RBP22.07■■□□□ 1.12
VTI1B-201ENST00000216456 A0A0J9YYE9 177 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 TRBC1P01850 177 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 H2AFZP0C0S5 128 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 ETV5P41161 510 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 GPR1P46091 355 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 B4GALNT1Q00973 533 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 CTBSQ01459 385 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 CLN3Q13286 438 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 TGIF1Q15583 401 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 AMZ1Q400G9 498 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 RALGPS1Q5JS13 557 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 H2AFVQ71UI9 128 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 CLEC14AQ86T13 490 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 ARL14Q8N4G2 192 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 ZDHHC1Q8WTX9 485 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 CTNNBL1Q8WYA6 563 aaPredicted RBP22.06■■□□□ 1.12
VTI1B-201ENST00000216456 AP2M1Q96CW1 435 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 TDRD1Q9BXT4 1180 aaKnown RBP22.06■■□□□ 1.12
VTI1B-201ENST00000216456 CEP41Q9BYV8 373 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 SEMA6CQ9H3T2 930 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 DTLQ9NZJ0 730 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 PISDQ9UG56 409 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 SLC17A4Q9Y2C5 497 aa22.06■■□□□ 1.12
VTI1B-201ENST00000216456 UNC13CQ8NB66 2214 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 KCNK1O00180 336 aa22.05■■□□□ 1.12
VTI1B-201ENST00000216456 PSMD11O00231 422 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms