RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 EIF1P41567 113 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 NSFP46459 744 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 RNF144AP50876 292 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TPMTP51580 245 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 NCALDP61601 193 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 NRG1Q02297 640 aaPredicted RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DPYDQ12882 1025 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 C2CD6Q53TS8 623 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 DENND5AQ6IQ26 1287 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SLCO6A1Q86UG4 719 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 FBXO11Q86XK2 927 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ACBD4Q8NC06 268 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 GATAD2BQ8WXI9 593 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 CLP1Q92989 425 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TESCQ96BS2 214 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SGTBQ96EQ0 304 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PKIBQ9C010 78 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ARHGEF4Q9NR80 690 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 TSPAN16Q9UKR8 245 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 ZFR2Q9UPR6 939 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 PIN4Q9Y237 131 aaKnown RBP4.32□□□□□ -1.72
SCN3A-209ENST00000639244 MAN2B2Q9Y2E5 1009 aa4.32□□□□□ -1.72
SCN3A-209ENST00000639244 SOBPA7XYQ1 873 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 EFSO43281 561 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 SPAG6O75602 509 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 EOMESO95936 686 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PNPP00491 289 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 OGNP20774 298 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 GCH1P30793 250 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 RFC2P35250 354 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 MAGEA2P43356 314 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ARSEP51690 589 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PRKCZQ05513 592 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF267Q14586 743 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ETFDHQ16134 617 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF468Q5VIY5 522 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 HGSNATQ68CP4 663 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF772Q68DY9 489 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ANKRD26P1Q6NSI1 321 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 POTEHQ6S545 545 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 RTL4Q6ZR62 310 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 SLC13A5Q86YT5 568 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 HIPK1Q86Z02 1210 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 KLHL7Q8IXQ5 586 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ADPRHL1Q8NDY3 354 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 FAM172AQ8WUF8 416 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 GTF3AQ92664 365 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 TMEM80Q96HE8 168 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 TMED9Q9BVK6 235 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 MVB12BQ9H7P6 319 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 DDX43Q9NXZ2 648 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF225Q9UK10 706 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PCDHB8Q9UN66 801 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PDS5BQ9NTI5 1447 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF521Q96K83 1311 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 CBY3A6NI87 242 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF233A6NK53 670 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 EML1O00423 815 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 HCRTR2O43614 444 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 MLYCDO95822 493 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PRPS1L1P21108 318 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 ABCB4P21439 1286 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 IFI35P80217 286 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 FOLH1Q04609 750 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PTPN12Q05209 780 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 MERTKQ12866 999 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 GBX1Q14549 363 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 TUSC1Q2TAM9 212 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PPM1LQ5SGD2 360 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 IZUMO2Q6UXV1 221 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PLEKHG7Q6ZR37 379 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 KRT25Q7Z3Z0 450 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 KIF2BQ8N4N8 673 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 BEST2Q8NFU1 509 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 AENQ8WTP8 325 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 UFD1Q92890 307 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 MARC2Q969Z3 335 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 FAM71F1Q96KD3 344 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PUS7LQ9H0K6 701 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 BOLA2Q9H3K6 86 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 MGAT4AQ9UM21 535 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 NSFL1CQ9UNZ2 370 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 PCDHGB1Q9Y5G3 927 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 BLMP54132 1417 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 A0A087X0M5 115 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 A0A1B0GX30 115 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 hCG_1809904A0A1W2PP81 198 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 A0A1W2PPE2 198 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 A0A1W2PR64 198 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 GSAPA4D1B5 854 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 BTBD17A6NE02 478 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 RHPN2P1A8MT19 583 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 STX7O15400 261 aaKnown RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 KLF4O43474 513 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 GADD45BO75293 160 aaPredicted RBP4.31□□□□□ -1.72
SCN3A-209ENST00000639244 CALCAP01258 141 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 GSNP06396 782 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 MAGP20916 626 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 FECHP22830 423 aa4.31□□□□□ -1.72
SCN3A-209ENST00000639244 KIR3DL2P43630 455 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms