RNA–Protein interactions for RNA: ENST00000637533.1

MECP2-222, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 140 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-222ENST00000637533 SLC18A3Q16572 532 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 SMN1Q16637 294 aaKnown RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 PFKFB3Q16875 520 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 ODF4Q2M2E3 257 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 SGSM1Q2NKQ1 1148 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 CR1LQ2VPA4 569 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 LETM2Q2VYF4 491 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 POM121L1PQ3SYA9 428 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 SUPT20HL1Q3ZLR7 823 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 TIGD5Q53EQ6 642 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 IFI44LQ53G44 452 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 ALG10Q5BKT4 473 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 TMEM196Q5HYL7 178 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 ALG10BQ5I7T1 473 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 C6orf10Q5SRN2 563 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 DCST1Q5T197 706 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 CCDC183Q5T5S1 534 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 GKAP1Q5VSY0 366 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 C1orf189Q5VU69 101 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 TCERG1LQ5VWI1 586 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 GGNBP1Q5YKI7 109 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 RAET1GQ6H3X3 334 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 FAM109BQ6ICB4 259 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 RGS7BPQ6MZT1 257 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 TTI2Q6NXR4 508 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 CAVIN1Q6NZI2 390 aaKnown RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 TAF2Q6P1X5 1199 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 WDR73Q6P4I2 378 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 ZNF474Q6S9Z5 364 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 METAP1DQ6UB28 335 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 CWC27Q6UX04 472 aaKnown RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 TMEM108Q6UXF1 575 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 LRIG3Q6UXM1 1119 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 RPTNQ6XPR3 784 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 LIPIQ6XZB0 460 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 B3GLCTQ6Y288 498 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 MACC1Q6ZN28 852 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 GCNT7Q6ZNI0 430 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 SEPT14Q6ZU15 432 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 TPRG1Q6ZUI0 275 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 INTS8Q75QN2 995 aaKnown RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 CYB5R4Q7L1T6 521 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 RTL10Q7L3V2 364 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 LINGO2Q7L985 606 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 GPRIN1Q7Z2K8 1008 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 NUP54Q7Z3B4 507 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 ABI3BPQ7Z7G0 1075 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 NEK8Q86SG6 692 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 PATL1Q86TB9 770 aaKnown RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 TBC1D26Q86UD7 250 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 NBPF5PQ86XG9 351 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 PALB2Q86YC2 1186 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 ZFPM1Q8IX07 1006 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 ADGRF3Q8IZF5 1079 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 CENPLQ8N0S6 344 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 ARMC10Q8N2F6 343 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 LCORLQ8N3X6 602 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 C12orf76Q8N812 135 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 LINC00482Q8N8I6 264 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 PI4KAP1Q8N8J0 262 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 ANKRD53Q8N9V6 530 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 PDPRQ8NCN5 879 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 BEST2Q8NFU1 509 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 OR52K1Q8NGK4 314 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 OR2I1PQ8NGU4 316 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 OR10T2Q8NGX3 314 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 OR8K3Q8NH51 312 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 SHKBP1Q8TBC3 707 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 SLC22A8Q8TCC7 542 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 MIPOL1Q8TD10 442 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 SH3RF3Q8TEJ3 882 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 GIPC3Q8TF64 312 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 PTPMT1Q8WUK0 201 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 SOCS4Q8WXH5 440 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 SEPT1Q8WYJ6 367 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 DPF1Q92782 380 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 KCNJ9Q92806 393 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 EXT2Q93063 718 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 RILPL2Q969X0 211 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 TP53INP1Q96A56 240 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 TMEM186Q96B77 213 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 MOB3AQ96BX8 217 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 MIEF2Q96C03 454 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 C18orf8Q96DM3 657 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 MTERF3Q96E29 417 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 ZC3HAV1LQ96H79 300 aaKnown RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 ZNF764Q96H86 408 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 PDLIM5Q96HC4 596 aaKnown RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 CDKN2AIPNLQ96HQ2 116 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 KIRREL1Q96J84 757 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 KLHL15Q96M94 604 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 NLRP4Q96MN2 994 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 TSNARE1Q96NA8 513 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 ZNF570Q96NI8 536 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 KLHL5Q96PQ7 755 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 GSDMAQ96QA5 445 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 BBS4Q96RK4 519 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 UBL7Q96S82 380 aaPredicted RBP1.64□□□□□ -2.15
MECP2-222ENST00000637533 PCDHB18PQ96TA0 734 aa1.64□□□□□ -2.15
MECP2-222ENST00000637533 PARK7Q99497 189 aaKnown RBP1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms