RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 SPIDRQ14159 915 aa18.97■□□□□ 0.63
CLN6-221ENST00000637494 ISXQ2M1V0 245 aa18.97■□□□□ 0.63
CLN6-221ENST00000637494 PERM1Q5SV97 790 aa18.97■□□□□ 0.63
CLN6-221ENST00000637494 CRTC1Q6UUV9 634 aa18.97■□□□□ 0.63
CLN6-221ENST00000637494 PDZD3Q86UT5 571 aa18.97■□□□□ 0.63
CLN6-221ENST00000637494 OR1E3Q8WZA6 343 aa18.97■□□□□ 0.63
CLN6-221ENST00000637494 MAML1Q92585 1016 aa18.97■□□□□ 0.63
CLN6-221ENST00000637494 FAF2Q96CS3 445 aa18.97■□□□□ 0.63
CLN6-221ENST00000637494 DTD2Q96FN9 168 aa18.97■□□□□ 0.63
CLN6-221ENST00000637494 CYP4F12Q9HCS2 524 aa18.97■□□□□ 0.63
CLN6-221ENST00000637494 SHROOM3Q8TF72 1996 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 LRRD1A4D1F6 860 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 NPIPB15A6NHN6 443 aaPredicted RBP18.96■□□□□ 0.63
CLN6-221ENST00000637494 AKR1B15C9JRZ8 316 aaPredicted RBP18.96■□□□□ 0.63
CLN6-221ENST00000637494 MAP3K6O95382 1288 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 ZNF30P17039 623 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 CTPS1P17812 591 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 ETV3P41162 512 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 TBC1D25Q3MII6 688 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 RAET1GQ6H3X3 334 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 CCDC13Q8IYE1 715 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLN6-221ENST00000637494 KYQ8NBH2 561 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 FAM46DQ8NEK8 389 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 SNIP1Q8TAD8 396 aaKnown RBP18.96■□□□□ 0.63
CLN6-221ENST00000637494 ZNF578Q96N58 590 aaPredicted RBP18.96■□□□□ 0.63
CLN6-221ENST00000637494 RNF157Q96PX1 679 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 MCCC1Q96RQ3 725 aaPredicted RBP18.96■□□□□ 0.63
CLN6-221ENST00000637494 CHP1Q99653 195 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 POLR1BQ9H9Y6 1135 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 FGF22Q9HCT0 170 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 SPTLC3Q9NUV7 552 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 PPIL1Q9Y3C6 166 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 ADAMTS20P59510 1910 aa18.96■□□□□ 0.63
CLN6-221ENST00000637494 PRSS38A1L453 326 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 ZNF487B1APH4 448 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 MPOP05164 745 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 PYGLP06737 847 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 ZFXP17010 805 aaPredicted RBP18.95■□□□□ 0.62
CLN6-221ENST00000637494 GM2AP17900 193 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 RBMS1P29558 406 aaKnown RBP18.95■□□□□ 0.62
CLN6-221ENST00000637494 LSSP48449 732 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 PEX6Q13608 980 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 ALG1LQ6GMV1 187 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 HSD11B1LQ7Z5J1 315 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 HEATR4Q86WZ0 1026 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 VSIG1Q86XK7 387 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 CPNE8Q86YQ8 564 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 KIAA1524Q8TCG1 905 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 PIH1D2Q8WWB5 315 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 HDAC11Q96DB2 347 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 MRPL40Q9NQ50 206 aaKnown RBP18.95■□□□□ 0.62
CLN6-221ENST00000637494 INTUQ9ULD6 942 aa18.95■□□□□ 0.62
CLN6-221ENST00000637494 TLX3O43711 291 aaPredicted RBP18.94■□□□□ 0.62
CLN6-221ENST00000637494 LHCGRP22888 699 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 TEAD1P28347 426 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 SLC1A1P43005 524 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 GPR1P46091 355 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 PCBP4P57723 403 aaKnown RBP18.94■□□□□ 0.62
CLN6-221ENST00000637494 RPL26P61254 145 aaKnown RBP18.94■□□□□ 0.62
CLN6-221ENST00000637494 DSC2Q02487 901 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 GBE1Q04446 702 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 ILF3Q12906 894 aaKnown RBP eCLIP18.94■□□□□ 0.62
CLN6-221ENST00000637494 C3orf38Q5JPI3 329 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 Q6ZVL8 140 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 PQLC3Q8N755 202 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 RAPGEF5Q92565 580 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 CCDC74AQ96AQ1 378 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 GFM1Q96RP9 751 aaKnown RBP18.94■□□□□ 0.62
CLN6-221ENST00000637494 LGMNQ99538 433 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 LGR4Q9BXB1 951 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 TEX101Q9BY14 249 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 GSDMCQ9BYG8 508 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 TRIM5Q9C035 493 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 DPEP2Q9H4A9 486 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 CARS2Q9HA77 564 aaKnown RBP18.94■□□□□ 0.62
CLN6-221ENST00000637494 THSD1Q9NS62 852 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 DDX56Q9NY93 547 aaKnown RBP18.94■□□□□ 0.62
CLN6-221ENST00000637494 DTLQ9NZJ0 730 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 RPL26L1Q9UNX3 145 aaKnown RBP18.94■□□□□ 0.62
CLN6-221ENST00000637494 HEY1Q9Y5J3 304 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 WDFY3Q8IZQ1 3526 aa18.94■□□□□ 0.62
CLN6-221ENST00000637494 A0A0J9YYE9 177 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 TMX2-CTNND1H3BSU7 103 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 APOL1O14791 398 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 FZD6O60353 706 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 MTA2O94776 668 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 TRBC1P01850 177 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 KRT1P04264 644 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 PDHA1P08559 390 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 ERVPABLB-1P60509 514 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 DPTQ07507 201 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 LRRC38Q5VT99 294 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 LRRC66Q68CR7 880 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 TSPAN33Q86UF1 283 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 RHOT1Q8IXI2 618 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 ZNF248Q8NDW4 579 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 AP2M1Q96CW1 435 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 ATXN7L3BQ96GX2 97 aa18.93■□□□□ 0.62
CLN6-221ENST00000637494 TDRD1Q9BXT4 1180 aaKnown RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms