RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.49■□□□□ 0.55
CLN6-220ENST00000637450 KCTD5Q9NXV2 234 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 LRIT1Q9P2V4 623 aa18.49■□□□□ 0.55
CLN6-220ENST00000637450 PRSS38A1L453 326 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 CAPN8A6NHC0 703 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 HEXIM1O94992 359 aaKnown RBP18.48■□□□□ 0.55
CLN6-220ENST00000637450 MYCLP1P12525 358 aaPredicted RBP18.48■□□□□ 0.55
CLN6-220ENST00000637450 SLC5A2P31639 672 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 VIPR1P32241 457 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 ZNF165P49910 485 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 ZFP36L1Q07352 338 aaKnown RBP18.48■□□□□ 0.55
CLN6-220ENST00000637450 PIGHQ14442 188 aaPredicted RBP18.48■□□□□ 0.55
CLN6-220ENST00000637450 TSR1Q2NL82 804 aaKnown RBP18.48■□□□□ 0.55
CLN6-220ENST00000637450 C14orf28Q4W4Y0 310 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 FIGNQ5HY92 759 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 ZNF605Q86T29 641 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 PDCD6IPQ8WUM4 868 aaKnown RBP18.48■□□□□ 0.55
CLN6-220ENST00000637450 NUS1Q96E22 293 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 TEX101Q9BY14 249 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 DPEP2Q9H4A9 486 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.48■□□□□ 0.55
CLN6-220ENST00000637450 MOSPD1Q9UJG1 213 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 ATXN7L1Q9ULK2 861 aaPredicted RBP18.48■□□□□ 0.55
CLN6-220ENST00000637450 PHTF1Q9UMS5 762 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 RNF215Q9Y6U7 377 aa18.48■□□□□ 0.55
CLN6-220ENST00000637450 B4DGG1 531 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 NUDT21O43809 227 aaKnown RBP18.47■□□□□ 0.55
CLN6-220ENST00000637450 CPP00450 1065 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 FUCA1P04066 466 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 CEACAM5P06731 702 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 NFKBIAP25963 317 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 TRAF2Q12933 501 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 IQCB1Q15051 598 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 RALGPS1Q5JS13 557 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 HGSNATQ68CP4 663 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 SPECC1LQ69YQ0 1117 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 TXNRD3NBQ6F5E7 133 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 CCDC81Q6ZN84 652 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 SPRED1Q7Z699 444 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 NRROSQ86YC3 692 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 BBS5Q8N3I7 341 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 GPBAR1Q8TDU6 330 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 TEKT4Q8WW24 435 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 SCRN2Q96FV2 425 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 CARS2Q9HA77 564 aaKnown RBP18.47■□□□□ 0.55
CLN6-220ENST00000637450 PCDH18Q9HCL0 1135 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 PHPT1Q9NRX4 125 aaPredicted RBP18.47■□□□□ 0.55
CLN6-220ENST00000637450 SPATS2LQ9NUQ6 558 aaKnown RBP18.47■□□□□ 0.55
CLN6-220ENST00000637450 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.47■□□□□ 0.55
CLN6-220ENST00000637450 ACSL6Q9UKU0 697 aa18.47■□□□□ 0.55
CLN6-220ENST00000637450 BZW2Q9Y6E2 419 aaKnown RBP18.47■□□□□ 0.55
CLN6-220ENST00000637450 SERPINC1P01008 464 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 CYP2A6P11509 494 aaPredicted RBP18.46■□□□□ 0.55
CLN6-220ENST00000637450 HGFP14210 728 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 PLA2G2AP14555 144 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 CCNB1P14635 433 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 LHCGRP22888 699 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 ETV3P41162 512 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 CDH6P55285 790 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 MAXP61244 160 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 B4GALNT1Q00973 533 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 ARHGEF7Q14155 803 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 ZSCAN23Q3MJ62 389 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 MARC1Q5VT66 337 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 DENND2CQ68D51 928 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 HSD11B1LQ7Z5J1 315 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 HEATR4Q86WZ0 1026 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 C17orf82Q86X59 251 aaPredicted RBP18.46■□□□□ 0.55
CLN6-220ENST00000637450 ATPAF2Q8N5M1 289 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 NIPA2Q8N8Q9 360 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 KIAA1524Q8TCG1 905 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 NSMCE1Q8WV22 266 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 DTD2Q96FN9 168 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 MCCC1Q96RQ3 725 aaPredicted RBP18.46■□□□□ 0.55
CLN6-220ENST00000637450 CCNL2Q96S94 520 aaPredicted RBP18.46■□□□□ 0.55
CLN6-220ENST00000637450 FRMD8Q9BZ67 464 aaPredicted RBP18.46■□□□□ 0.55
CLN6-220ENST00000637450 PPIL1Q9Y3C6 166 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 LOXL2Q9Y4K0 774 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 LRP4O75096 1905 aa18.46■□□□□ 0.55
CLN6-220ENST00000637450 AHCTF1Q8WYP5 2266 aa18.46■□□□□ 0.54
CLN6-220ENST00000637450 PSMD11O00231 422 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 NVLO15381 856 aaKnown RBP18.45■□□□□ 0.54
CLN6-220ENST00000637450 EFSO43281 561 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 PGLSO95336 258 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 FGF1P05230 155 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 JMJD7P0C870 316 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 IL4RP24394 825 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 TEAD1P28347 426 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 SERPINB6P35237 376 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 MMP13P45452 471 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 SLC25A11Q02978 314 aaKnown RBP18.45■□□□□ 0.54
CLN6-220ENST00000637450 Q6ZVL8 140 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 TMPRSS9Q7Z410 1059 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 JAMLQ86YT9 394 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 LRRC49Q8IUZ0 686 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 PIH1D2Q8WWB5 315 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 SYN2Q92777 582 aaPredicted RBP18.45■□□□□ 0.54
CLN6-220ENST00000637450 TMEM159Q96B96 161 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 BTBD6Q96KE9 485 aa18.45■□□□□ 0.54
CLN6-220ENST00000637450 GSDMCQ9BYG8 508 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms