RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 MFSD11O43934 449 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 AKR1B10O60218 316 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 DXOO77932 396 aaKnown RBP17.94■□□□□ 0.46
PNKP-225ENST00000636214 PROSCO94903 275 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 HEXIM1O94992 359 aaKnown RBP17.94■□□□□ 0.46
PNKP-225ENST00000636214 PEX11BO96011 259 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 MYCLP1P12525 358 aaPredicted RBP17.94■□□□□ 0.46
PNKP-225ENST00000636214 MX2P20592 715 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 CES1P23141 567 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 TRIM23P36406 574 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 GARSP41250 739 aaKnown RBP17.94■□□□□ 0.46
PNKP-225ENST00000636214 TRAF2Q12933 501 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 SLC18A3Q16572 532 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 IFI16Q16666 785 aaKnown RBP17.94■□□□□ 0.46
PNKP-225ENST00000636214 KIF26BQ2KJY2 2108 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 SPECC1LQ69YQ0 1117 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 RAET1GQ6H3X3 334 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 ARL14Q8N4G2 192 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 WDR36Q8NI36 951 aaKnown RBP17.94■□□□□ 0.46
PNKP-225ENST00000636214 KIAA1524Q8TCG1 905 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 KCNE4Q8WWG9 221 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 CRELD1Q96HD1 420 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 COQ10AQ96MF6 247 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 FCRL3Q96P31 734 aaPredicted RBP17.94■□□□□ 0.46
PNKP-225ENST00000636214 SEMA3CQ99985 751 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 ZNF670Q9BS34 389 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 STRADBQ9C0K7 418 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 FGF22Q9HCT0 170 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 ENTPD2Q9Y5L3 495 aa17.94■□□□□ 0.46
PNKP-225ENST00000636214 ARHGEF17Q96PE2 2063 aaPredicted RBP17.94■□□□□ 0.46
PNKP-225ENST00000636214 PRSS38A1L453 326 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 PGLSO95336 258 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 RPLP0P05388 317 aaKnown RBP17.93■□□□□ 0.46
PNKP-225ENST00000636214 CD48P09326 243 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 HOXB3P14651 431 aaPredicted RBP17.93■□□□□ 0.46
PNKP-225ENST00000636214 ETV3P41162 512 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 UCNP55089 124 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 ILF3Q12906 894 aaKnown RBP eCLIP17.93■□□□□ 0.46
PNKP-225ENST00000636214 BIRC2Q13490 618 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 PEX6Q13608 980 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 DPYSL3Q14195 570 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 ODF2Q5BJF6 829 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 ANKRD20A8PQ5CZ79 823 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 HEATR4Q86WZ0 1026 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 SPACA3Q8IXA5 215 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 OR8K1Q8NGG5 319 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 CCDC97Q96F63 343 aaPredicted RBP17.93■□□□□ 0.46
PNKP-225ENST00000636214 DTD2Q96FN9 168 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 SCRN2Q96FV2 425 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 UBL7Q96S82 380 aaPredicted RBP17.93■□□□□ 0.46
PNKP-225ENST00000636214 DPEP2Q9H4A9 486 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 CARS2Q9HA77 564 aaKnown RBP17.93■□□□□ 0.46
PNKP-225ENST00000636214 MRPL40Q9NQ50 206 aaKnown RBP17.93■□□□□ 0.46
PNKP-225ENST00000636214 DNPEPQ9ULA0 475 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 RAI2Q9Y5P3 530 aa17.93■□□□□ 0.46
PNKP-225ENST00000636214 CCDC187A0A096LP49 1063 aa17.92■□□□□ 0.46
PNKP-225ENST00000636214 NPIPB15A6NHN6 443 aaPredicted RBP17.92■□□□□ 0.46
PNKP-225ENST00000636214 B4DGG1 531 aa17.92■□□□□ 0.46
PNKP-225ENST00000636214 MATN3O15232 486 aa17.92■□□□□ 0.46
PNKP-225ENST00000636214 HNRNPH3P31942 346 aaKnown RBP17.92■□□□□ 0.46
PNKP-225ENST00000636214 GALNT2Q10471 571 aa17.92■□□□□ 0.46
PNKP-225ENST00000636214 PAFAH1B3Q15102 231 aaKnown RBP17.92■□□□□ 0.46
PNKP-225ENST00000636214 NCBP2-AS2Q69YL0 99 aa17.92■□□□□ 0.46
PNKP-225ENST00000636214 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.92■□□□□ 0.46
PNKP-225ENST00000636214 NSMCE3Q96MG7 304 aa17.92■□□□□ 0.46
PNKP-225ENST00000636214 GSDMCQ9BYG8 508 aa17.92■□□□□ 0.46
PNKP-225ENST00000636214 EPB41L5Q9HCM4 733 aa17.92■□□□□ 0.46
PNKP-225ENST00000636214 RBM22Q9NW64 420 aaKnown RBP eCLIP17.92■□□□□ 0.461e-9■■■□□ 15.2
PNKP-225ENST00000636214 AMACRQ9UHK6 382 aa17.92■□□□□ 0.46
PNKP-225ENST00000636214 PCDHGA8Q9Y5G5 932 aa17.92■□□□□ 0.46
PNKP-225ENST00000636214 LOC400499M0QZD8 3231 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 SSU72P8A0A1W2PR75 194 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 ZW10O43264 779 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 GLB1P16278 677 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 CTPS1P17812 591 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 GM2AP17900 193 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 MLLT3P42568 568 aaPredicted RBP17.91■□□□□ 0.46
PNKP-225ENST00000636214 GPR1P46091 355 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 CXADRP78310 365 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 TLE3Q04726 772 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 EIF3IQ13347 325 aaKnown RBP17.91■□□□□ 0.46
PNKP-225ENST00000636214 SOWAHCQ53LP3 525 aaPredicted RBP17.91■□□□□ 0.46
PNKP-225ENST00000636214 IGF2-ASQ6U949 168 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 GPR155Q7Z3F1 870 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 CCNJLQ8IV13 435 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 TEX26Q8N6G2 289 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 Q8N9G6 341 aaPredicted RBP17.91■□□□□ 0.46
PNKP-225ENST00000636214 CCNYQ8ND76 341 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 FAM71BQ8TC56 605 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.91■□□□□ 0.46
PNKP-225ENST00000636214 TMEM74Q96NL1 305 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 MCCC1Q96RQ3 725 aaPredicted RBP17.91■□□□□ 0.46
PNKP-225ENST00000636214 LGR4Q9BXB1 951 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 TMEM168Q9H0V1 697 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 LRRN3Q9H3W5 708 aa17.91■□□□□ 0.46
PNKP-225ENST00000636214 D6RAR5 112 aa17.9■□□□□ 0.46
PNKP-225ENST00000636214 NTN3O00634 580 aaPredicted RBP17.9■□□□□ 0.46
PNKP-225ENST00000636214 MAP3K6O95382 1288 aa17.9■□□□□ 0.46
PNKP-225ENST00000636214 PYGLP06737 847 aa17.9■□□□□ 0.46
PNKP-225ENST00000636214 TMEM253P0C7T8 217 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms