RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ARID3BQ8IVW6 561 aaPredicted RBP6.03□□□□□ -1.44
SCN1A-212ENST00000636194 ADGRF2Q8IZF7 708 aa6.03□□□□□ -1.44
SCN1A-212ENST00000636194 OR2L2Q8NH16 312 aa6.03□□□□□ -1.44
SCN1A-212ENST00000636194 DNAJB14Q8TBM8 379 aa6.03□□□□□ -1.44
SCN1A-212ENST00000636194 EBNA1BP2Q99848 306 aaKnown RBP6.03□□□□□ -1.44
SCN1A-212ENST00000636194 ZSCAN5AQ9BUG6 496 aa6.03□□□□□ -1.44
SCN1A-212ENST00000636194 OR10A4Q9H209 315 aa6.03□□□□□ -1.44
SCN1A-212ENST00000636194 CFL2Q9Y281 166 aa6.03□□□□□ -1.44
SCN1A-212ENST00000636194 NPHP3-ACAD11A0A0J9YXS1 232 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 KANTRA0A1W2PQU2 76 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 TULP3O75386 442 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 PIM1P11309 404 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 PTPRAP18433 802 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 MDH1P40925 334 aaKnown RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ARMC12Q5T9G4 340 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ARSKQ6UWY0 536 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CAND1Q86VP6 1230 aaKnown RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ARHGAP12Q8IWW6 846 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SKA3Q8IX90 412 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 RASGRP4Q8TDF6 673 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 LRRC58Q96CX6 371 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 COQ8BQ96D53 544 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 PHF21BQ96EK2 531 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CITED4Q96RK1 184 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SHCBP1LQ9BZQ2 653 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 RHBGQ9H310 441 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 EPB41L1Q9H4G0 881 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 BRD9Q9H8M2 597 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 NDUFB9Q9Y6M9 179 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 OR10H3O60404 316 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 MT-CO2P00403 227 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 GSTT2P0CG29 244 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF823P16415 610 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF37AP17032 561 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 DDX6P26196 483 aaKnown RBP eCLIP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CMPK1P30085 196 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 KCNJ5P48544 419 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 VLDLRP98155 873 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 EFEMP1Q12805 493 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 GRAPQ13588 217 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 FASTKQ14296 549 aaKnown RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SGCBQ16585 318 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 DNAJB7Q7Z6W7 309 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 LGI2Q8N0V4 545 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 GRAPLQ8TC17 118 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 KLF6Q99612 283 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 HGH1Q9BTY7 390 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 GPR108Q9NPR9 543 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 TUBG2Q9NRH3 451 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 FAM105AQ9NUU6 356 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SLAIN2Q9P270 581 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 TAGLN3Q9UI15 199 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 MED31Q9Y3C7 131 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZDBF2Q9HCK1 2354 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 A2MP01023 1474 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 GAKO14976 1311 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 KIF26BQ2KJY2 2108 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SULT1B1O43704 296 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 OXSR1O95747 527 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF20P17024 532 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 HSD11B1P28845 292 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 TTPAP49638 278 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 USP46P62068 366 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 MGAT5Q09328 741 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 MPPED2Q15777 294 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SPIN3Q5JUX0 258 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 EFCAB12Q6NXP0 572 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 DOK6Q6PKX4 331 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 IL27RAQ6UWB1 636 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 RIPOR1Q6ZS17 1223 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ILDR2Q71H61 639 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 TMC3Q7Z5M5 1100 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 GPAT4Q86UL3 456 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SERPINB11Q96P15 392 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 DENND2DQ9H6A0 471 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 STARD7Q9NQZ5 370 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZSWIM5Q9P217 1185 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ERVK-18Q9QC07 812 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CAMSAP1Q5T5Y3 1602 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ATP10AO60312 1499 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 PLEKHG1Q9ULL1 1385 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CASKO14936 926 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CASC3O15234 703 aaKnown RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 AHCYL1O43865 530 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 RAD51DO75771 328 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SASH1O94885 1247 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 A1BGP04217 495 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 FMO5P49326 533 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 CRHR2Q13324 411 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 MPP3Q13368 585 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 R3HDM1Q15032 1099 aaKnown RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 GRTP1Q5TC63 336 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SLC16A9Q7RTY1 509 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 NT5DC3Q86UY8 548 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 ZNF808Q8N4W9 903 aaPredicted RBP6.02□□□□□ -1.45
SCN1A-212ENST00000636194 FAM71DQ8N9W8 422 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SPERTQ8NA61 448 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SIPA1Q96FS4 1042 aa6.02□□□□□ -1.45
SCN1A-212ENST00000636194 SMARCD1Q96GM5 515 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms