RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PLA2G2AP14555 144 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 NDUFB7P17568 137 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 PRKCHP24723 683 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 ADORA1P30542 326 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 PAFAH1B1P43034 410 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 JAK3P52333 1124 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 DRG2P55039 364 aaKnown RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 GPC5P78333 572 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 CDK18Q07002 472 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 GOLGA8FQ08AF8 430 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 PTP4A2Q12974 167 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 ARHGEF6Q15052 776 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 TOMM20Q15388 145 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 MEA1Q16626 185 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 SHROOM1Q2M3G4 852 aaPredicted RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 ALDH1L2Q3SY69 923 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 ZNF585BQ52M93 769 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 CAVIN4Q5BKX8 364 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 TMEM63BQ5T3F8 832 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 FAM205BPQ63HN1 556 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 MIS18BP1Q6P0N0 1132 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 ANKRD16Q6P6B7 361 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 B4GALNT4Q76KP1 1039 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 MRPL10Q7Z7H8 261 aaKnown RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 DIS3L2Q8IYB7 885 aaKnown RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 PDILTQ8N807 584 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 C12orf76Q8N812 135 aaPredicted RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 SRFBP1Q8NEF9 429 aaKnown RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 ABHD11Q8NFV4 315 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 NFKBIDQ8NI38 313 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 CLEC4CQ8WTT0 213 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 TRIB2Q92519 343 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 ERP27Q96DN0 273 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 EDC3Q96F86 508 aaKnown RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 TIGD1Q96MW7 591 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 LENG8Q96PV6 779 aaPredicted RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 SERINC2Q96SA4 455 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 CD180Q99467 661 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 THAP7Q9BT49 309 aaPredicted RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 ELOVL1Q9BW60 279 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 FSD1LQ9BXM9 530 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 RNF26Q9BY78 433 aaPredicted RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 INTS2Q9H0H0 1204 aaKnown RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 TXNRD2Q9NNW7 524 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 DUSP22Q9NRW4 184 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 SLC22A11Q9NSA0 550 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 ABHD10Q9NUJ1 306 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 TXLNGQ9NUQ3 528 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 BEX4Q9NWD9 120 aaPredicted RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 NSMCE4AQ9NXX6 385 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 GAR1Q9NY12 217 aaKnown RBP2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 TAS2R10Q9NYW0 307 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 HCN3Q9P1Z3 774 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 SEMA5BQ9P283 1151 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 FZD4Q9ULV1 537 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 GPR34Q9UPC5 381 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 NAALADL1Q9UQQ1 740 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 TTLL3Q9Y4R7 772 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 KDM3AQ9Y4C1 1321 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 GBF1Q92538 1859 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 TANC1Q9C0D5 1861 aa2.65□□□□□ -1.99
SMARCB1-208ENST00000634926 BAZ2AQ9UIF9 1905 aaKnown RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ASPMQ8IZT6 3477 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 TEX22C9J3V5 150 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 NTN3O00634 580 aaPredicted RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 TNPO2O14787 897 aaKnown RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 TSPAN4O14817 238 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 DOK2O60496 412 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 PRAMEF2O60811 474 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 TIPRLO75663 272 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 CNMDO75829 334 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 CLEC3BP05452 202 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 HOXC6P09630 235 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 NPSP0C0P6 89 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 PEPDP12955 493 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 SCP2P22307 547 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 PRPH2P23942 346 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 HOXD10P28358 340 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 EPHA8P29322 1005 aaPredicted RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 HOXA7P31268 230 aaPredicted RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 CYP2C18P33260 490 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 GALNSP34059 522 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 GGT5P36269 586 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ARL1P40616 181 aaPredicted RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 IL15P40933 162 aaPredicted RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 STAT1P42224 750 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 RPS6KA3P51812 740 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 MVDP53602 400 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 CDH15P55291 814 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ARF3P61204 181 aaPredicted RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 RAE1P78406 368 aaKnown RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 ARF1P84077 181 aaKnown RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 PSG6Q00889 435 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 SETQ01105 290 aaPredicted RBP2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 CFHR3Q02985 330 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 MECOMQ03112 1051 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 TCP10Q12799 353 aa2.64□□□□□ -1.99
SMARCB1-208ENST00000634926 LMAN2Q12907 356 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms