RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 GPR34Q9UPC5 381 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 PCDHB1Q9Y5F3 818 aa10.85□□□□□ -0.67
SSBP4-215ENST00000625926 LRRD1A4D1F6 860 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 NPIPB15A6NHN6 443 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-215ENST00000625926 CYSRT1A8MQ03 144 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 RRP8O43159 456 aaKnown RBP10.84□□□□□ -0.67
SSBP4-215ENST00000625926 BRINP1O60477 761 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 TCEA3O75764 348 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 PDHA1P08559 390 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 MYCLP1P12525 358 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-215ENST00000625926 CTPS1P17812 591 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 CA4P22748 312 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 LHCGRP22888 699 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 SLC1A1P43005 524 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 EPHB1P54762 984 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 SLC10A2Q12908 348 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-215ENST00000625926 TCEA2Q15560 299 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 COL28A1Q2UY09 1125 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 PERM1Q5SV97 790 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 LRRC38Q5VT99 294 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 KCTD16Q68DU8 428 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 ALG1LQ6GMV1 187 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 CRTC1Q6UUV9 634 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 LRRC69Q6ZNQ3 347 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 Q6ZVL8 140 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 TAF8Q7Z7C8 310 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 CCDC13Q8IYE1 715 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 LSMEM2Q8N112 164 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.84□□□□□ -0.67
SSBP4-215ENST00000625926 OR6C4Q8NGE1 309 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 ARRDC2Q8TBH0 407 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-215ENST00000625926 OR1E3Q8WZA6 343 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 FGF11Q92914 225 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 HDAC11Q96DB2 347 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 DTD2Q96FN9 168 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 PDXPQ96GD0 296 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 CCDC3Q9BQI4 270 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 TEX101Q9BY14 249 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 CYP4F12Q9HCS2 524 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 FGF22Q9HCT0 170 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 MRPL40Q9NQ50 206 aaKnown RBP10.84□□□□□ -0.67
SSBP4-215ENST00000625926 PHPT1Q9NRX4 125 aaPredicted RBP10.84□□□□□ -0.67
SSBP4-215ENST00000625926 DTLQ9NZJ0 730 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 SIRPGQ9P1W8 387 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 MOSPD1Q9UJG1 213 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 INTUQ9ULD6 942 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 TTLL3Q9Y4R7 772 aa10.84□□□□□ -0.67
SSBP4-215ENST00000625926 WDFY3Q8IZQ1 3526 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 A0A0J9YYE9 177 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 ZNF487B1APH4 448 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 TLX3O43711 291 aaPredicted RBP10.83□□□□□ -0.68
SSBP4-215ENST00000625926 JCHAINP01591 159 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 TRBC1P01850 177 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 MPOP05164 745 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 HLA-DQB2P05538 268 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 ZFXP17010 805 aaPredicted RBP10.83□□□□□ -0.68
SSBP4-215ENST00000625926 ZNF30P17039 623 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 TEAD1P28347 426 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 EIF2S3P41091 472 aaKnown RBP10.83□□□□□ -0.68
SSBP4-215ENST00000625926 LSSP48449 732 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 RPL26P61254 145 aaKnown RBP10.83□□□□□ -0.68
SSBP4-215ENST00000625926 DSC2Q02487 901 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 DPTQ07507 201 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 TBX2Q13207 712 aaPredicted RBP10.83□□□□□ -0.68
SSBP4-215ENST00000625926 TCEAL1Q15170 157 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 PTPRRQ15256 657 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 ODF2Q5BJF6 829 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 LRRC66Q68CR7 880 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 SLC9A4Q6AI14 798 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 OGFOD3Q6PK18 319 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 SARM1Q6SZW1 724 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 RBM44Q6ZP01 1051 aaKnown RBP10.83□□□□□ -0.68
SSBP4-215ENST00000625926 TECPR1Q7Z6L1 1165 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 TSPAN33Q86UF1 283 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 NLRP8Q86W28 1048 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 VSIG1Q86XK7 387 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 RHOT1Q8IXI2 618 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 PELI3Q8N2H9 469 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 PLD5Q8N7P1 536 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 KYQ8NBH2 561 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 FAM46DQ8NEK8 389 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 SNIP1Q8TAD8 396 aaKnown RBP10.83□□□□□ -0.68
SSBP4-215ENST00000625926 LRRN4Q8WUT4 740 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 LGMNQ99538 433 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 TDRD1Q9BXT4 1180 aaKnown RBP10.83□□□□□ -0.68
SSBP4-215ENST00000625926 TRIM5Q9C035 493 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 TMEM168Q9H0V1 697 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 POLR1BQ9H9Y6 1135 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 DDX56Q9NY93 547 aaKnown RBP10.83□□□□□ -0.68
SSBP4-215ENST00000625926 DNPEPQ9ULA0 475 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 RPL26L1Q9UNX3 145 aaKnown RBP10.83□□□□□ -0.68
SSBP4-215ENST00000625926 CHKBQ9Y259 395 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 HEY1Q9Y5J3 304 aa10.83□□□□□ -0.68
SSBP4-215ENST00000625926 PRSS38A1L453 326 aa10.82□□□□□ -0.68
SSBP4-215ENST00000625926 GOLGA6CA6NDK9 693 aa10.82□□□□□ -0.68
SSBP4-215ENST00000625926 GOLGA6BA6NDN3 693 aa10.82□□□□□ -0.68
SSBP4-215ENST00000625926 C3orf70A6NLC5 250 aaPredicted RBP10.82□□□□□ -0.68
SSBP4-215ENST00000625926 KCNK1O00180 336 aa10.82□□□□□ -0.68
SSBP4-215ENST00000625926 APOL1O14791 398 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms