RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ITIH5Q86UX2 942 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 OR4K2Q8NGD2 314 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 ADAMTS19Q8TE59 1207 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 SH3RF2Q8TEC5 729 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 OSBPL1AQ9BXW6 950 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 IL21Q9HBE4 155 aa19.73■□□□□ 0.75
PCDHB11-202ENST00000624887 ANKRD36A6QL64 1941 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 OBSL1O75147 1896 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 C2orf81A6NN90 581 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 GFRA2O00451 464 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 NEMP1O14524 444 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 SNAP91O60641 907 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 TIMP1P01033 207 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 SLC4A1P02730 911 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 TRMT5Q32P41 509 aaKnown RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 INO80DQ53TQ3 878 aaPredicted RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 Q6ZNB5 142 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 CARNMT1Q8N4J0 409 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 HJURPQ8NCD3 748 aaPredicted RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 CLPTM1LQ96KA5 538 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 AARSD1Q9BTE6 412 aaKnown RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 ADGRE3Q9BY15 652 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 ALG9Q9H6U8 611 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 CYP4F12Q9HCS2 524 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 SLC7A8Q9UHI5 535 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 PCDHGC4Q9Y5F7 938 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 A0A088AWK7 358 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 TRIM43BA6NCK2 446 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 SLC22A2O15244 555 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 TEX28O15482 410 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 CIB2O75838 187 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 PENKP01210 267 aaPredicted RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 JUNP05412 331 aaKnown RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 COX4I1P13073 169 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 SP100P23497 879 aaPredicted RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 ITGB8P26012 769 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 MZF1P28698 734 aaPredicted RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 WDR5P61964 334 aaKnown RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 GALNT1Q10472 559 aaPredicted RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 SH2D4BQ5SQS7 431 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 LINGO4Q6UY18 593 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 GPR65Q8IYL9 337 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 CPSF7Q8N684 471 aaKnown RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 ARL14EPQ8N8R7 260 aaPredicted RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 LPCAT1Q8NF37 534 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 TRIM43Q96BQ3 446 aaPredicted RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 PPP1R36Q96LQ0 422 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 FEM1AQ9BSK4 669 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 TMEM106CQ9BVX2 250 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 MTF2Q9Y483 593 aaPredicted RBP19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 OR51B4Q9Y5P0 310 aa19.72■□□□□ 0.75
PCDHB11-202ENST00000624887 LOC100653049A0A140TA62 436 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 TRPC5OSA6NMA1 111 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 ANKRD66B4E2M5 251 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 LILRB3O75022 631 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 KRT34O76011 436 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 LUC7L3O95232 432 aaKnown RBP19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 PSMG1O95456 288 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 HSPA1AP0DMV8 641 aaKnown RBP19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 HSPA1BP0DMV9 641 aaKnown RBP19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 HNRNPLP14866 589 aaKnown RBP eCLIP19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 HDCP19113 662 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 ZXDBP98169 803 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 PDCD2Q16342 344 aaPredicted RBP19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 TXNDC8Q6A555 127 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 NCEH1Q6PIU2 408 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 FRMD7Q6ZUT3 714 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 GIMAP7Q8NHV1 300 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 TMA16Q96EY4 203 aaKnown RBP19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 MAELQ96JY0 434 aaKnown RBP19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 TCF12Q99081 682 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 ZNF385DQ9H6B1 395 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 EML4Q9HC35 981 aaKnown RBP19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 SSX2IPQ9Y2D8 614 aa19.71■□□□□ 0.75
PCDHB11-202ENST00000624887 TYW5A2RUC4 315 aaKnown RBP19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 KIAA0355O15063 1070 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 KRT36O76013 467 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 PRSS56P0CW18 603 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 CSF2RAP15509 400 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 CD1DP15813 335 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 ZNF37AP17032 561 aaPredicted RBP19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 IMPDH1P20839 514 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 LPOP22079 712 aaPredicted RBP19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 ADSLP30566 484 aaPredicted RBP19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 KCNC1P48547 511 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 NFKB2Q00653 900 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 SULT2A1Q06520 285 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 RCN1Q15293 331 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 C6orf163Q5TEZ5 329 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 FAM217AQ8IXS0 508 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 STMN2Q93045 179 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 PTERQ96BW5 349 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 PHF21BQ96EK2 531 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 FAR2Q96K12 515 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 LENG8Q96PV6 779 aaPredicted RBP19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 RTKNQ9BST9 563 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 LHX3Q9UBR4 397 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 CPQQ9Y646 472 aa19.7■□□□□ 0.74
PCDHB11-202ENST00000624887 TMEM233B4DJY2 109 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms