RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 VCPIP1Q96JH7 1222 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 NELFAQ9H3P2 528 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 IKZF3Q9UKT9 509 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 C1orf232A0A0U1RR37 186 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 B4DGG1 531 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TCEA3O75764 348 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 KAT7O95251 611 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 RLBP1P12271 317 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CCNB1P14635 433 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 ORC1Q13415 861 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TEX19Q8NA77 164 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SIDT2Q8NBJ9 832 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 KCNE4Q8WWG9 221 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CD101Q93033 1021 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 THAP11Q96EK4 314 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TPD52L3Q96J77 140 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 FAM111AQ96PZ2 611 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 A1CFQ9NQ94 594 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 PTGES3LE9PB15 166 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SMIM10L2AP0DMW4 78 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SMIM10L2BP0DMW5 78 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 UBE2NP61088 152 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TIMM50Q3ZCQ8 353 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 FAM133BQ5BKY9 247 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SETD9Q8NE22 299 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 MFSD3Q96ES6 412 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TUBGCP5Q96RT8 1024 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 AP1M1Q9BXS5 423 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TTYH3Q9C0H2 523 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 FAM124BQ9H5Z6 455 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 FZD3Q9NPG1 666 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 KBTBD4Q9NVX7 518 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CALML5Q9NZT1 146 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 GTF3C4Q9UKN8 822 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 PCDHA7Q9UN72 937 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SYN3O14994 580 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SEC24DO94855 1032 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 ENDOUP21128 410 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 INHBCP55103 352 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 VWA2Q5GFL6 755 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 QSOX2Q6ZRP7 698 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 EIF3MQ7L2H7 374 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 FBXO15Q8NCQ5 510 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 MCRS1Q96EZ8 462 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 EEF2KMTQ96G04 330 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TEFMQ96QE5 360 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 FAM172BPA6NC97 362 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 OR5H15A6NDH6 313 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 OR5H14A6NHG9 310 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 OR5H1A6NKK0 313 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 FAM155AB1AL88 458 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 AGPSO00116 658 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 GLRA3O75311 464 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 DUSP11O75319 330 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SNCGO76070 127 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF35P13682 527 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 HOXB2P14652 356 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 HSPA14Q0VDF9 509 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 ABHD17BQ5VST6 288 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 ANXA8L1Q5VT79 327 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CRTC3Q6UUV7 619 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TPCN2Q8NHX9 752 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TMEM74Q96NL1 305 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 DGAT2Q96PD7 388 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 RTP3Q9BQQ7 232 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 KCNK4Q9NYG8 393 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SLC22A14Q9Y267 594 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 ERI2A8K979 691 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 ADH1BP00325 375 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 HNF1AP20823 631 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 OR1D2P34982 312 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 ARPC4P59998 168 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 KYAT3Q6YP21 454 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TMEM192Q8IY95 271 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 BRSK1Q8TDC3 778 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 RASSF5Q8WWW0 418 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 PMEPA1Q969W9 287 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 RAD51AP1Q96B01 352 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 TCP11X1B4DZS4 312 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 PCSK2P16519 638 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 ARF4P18085 180 aaPredicted RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 PPIBP23284 216 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CCNFP41002 786 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 MPP3Q13368 585 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 NFYCQ13952 458 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 ZNF792Q3KQV3 632 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 KHDC1LQ5JSQ8 128 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 NDNFQ8TB73 568 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 CLP1Q92989 425 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 STRBPQ96SI9 672 aaKnown RBP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDKL5-205ENST00000623535 RCOR1Q9UKL0 485 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 SHOC2Q9UQ13 582 aa6.3□□□□□ -1.4
CDKL5-205ENST00000623535 A0A1W2PPH5 198 aa6.29□□□□□ -1.4
CDKL5-205ENST00000623535 PLIN3O60664 434 aa6.29□□□□□ -1.4
CDKL5-205ENST00000623535 ERCC2P18074 760 aa6.29□□□□□ -1.4
CDKL5-205ENST00000623535 BDNFP23560 247 aa6.29□□□□□ -1.4
CDKL5-205ENST00000623535 CRATP43155 626 aa6.29□□□□□ -1.4
CDKL5-205ENST00000623535 RTP1P59025 263 aa6.29□□□□□ -1.4
CDKL5-205ENST00000623535 FKBP1AP62942 108 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms