RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, human

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDHGC3-208	ENST00000622836	COQ10A	Q96MF6	247 aa		13.99	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	SMIM14	Q96QK8	99 aa		13.99	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	VAT1	Q99536	393 aa		13.99	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	APOO	Q9BUR5	198 aa		13.99	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	MLPH	Q9BV36	600 aa	Predicted RBP	13.99	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	GPR27	Q9NS67	375 aa		13.99	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	KCTD5	Q9NXV2	234 aa		13.99	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	UBP1	Q9NZI7	540 aa		13.99	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	APOBEC2	Q9Y235	224 aa	Known RBP	13.99	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PPIL1	Q9Y3C6	166 aa		13.99	□□□□□ -0.17
PCDHGC3-208	ENST00000622836		A0A0U1RQS6	177 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	C1orf232	A0A0U1RR37	186 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	NEMP2	A6NFY4	417 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836		F5H423	210 aa	Predicted RBP	13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	TNFSF14	O43557	240 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PMPCB	O75439	489 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PIAS2	O75928	621 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	LDOC1	O95751	146 aa	Predicted RBP	13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	MT-CYB	P00156	380 aa	Predicted RBP	13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PRL	P01236	227 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ALPPL2	P10696	532 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	RBP3	P10745	1247 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	NME1	P15531	152 aa	Known RBP	13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ZNF30	P17039	623 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	NFKB1	P19838	968 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	DGKA	P23743	735 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	RBL1	P28749	1068 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PPARD	Q03181	441 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	CDK18	Q07002	472 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	WASHC5	Q12768	1159 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	GALNT3	Q14435	633 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	TPRG1L	Q5T0D9	272 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	FAXC	Q5TGI0	409 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ENPP7	Q6UWV6	458 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	TTC13	Q8NBP0	860 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	SPATA22	Q8NHS9	363 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	CCHCR1	Q8TD31	782 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	DTD2	Q96FN9	168 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	CNDP2	Q96KP4	475 aa	Known RBP	13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	HERPUD2	Q9BSE4	406 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	SLC13A1	Q9BZW2	595 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	WDR26	Q9H7D7	661 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	C10orf88	Q9H8K7	445 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	UCKL1	Q9NWZ5	548 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	KL	Q9UEF7	1012 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	APOBEC3B	Q9UH17	382 aa	Known RBP	13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	FAM153A	Q9UHL3	310 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	RSPH14	Q9UHP6	348 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	CD84	Q9UIB8	345 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	TRHDE	Q9UKU6	1024 aa		13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	TDRD6	O60522	2096 aa	Known RBP	13.98	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ANKRD66	B4E2M5	251 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	KCNN4	O15554	427 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	SLC4A1	P02730	911 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	FTH1P19	P0C7X4	201 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	KEL	P23276	732 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	BLK	P51451	505 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	EIF2B5	Q13144	721 aa	Known RBP	13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	RPS6KA1	Q15418	735 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	QPCT	Q16769	361 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ITPRIPL1	Q6GPH6	555 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	RAET1G	Q6H3X3	334 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ESRP1	Q6NXG1	681 aa	Known RBP	13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PNCK	Q6P2M8	343 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836		Q6ZVL8	140 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	RD3	Q7Z3Z2	195 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	GLRX5	Q86SX6	157 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	HID1	Q8IV36	788 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PHACTR4	Q8IZ21	702 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ZNF567	Q8N184	647 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PNPLA1	Q8N8W4	532 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	BAHD1	Q8TBE0	780 aa	Predicted RBP	13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	LMX1A	Q8TE12	382 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	UBE2Q2	Q8WVN8	375 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	SPAST	Q9UBP0	616 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	MOSPD1	Q9UJG1	213 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PPP2R2C	Q9Y2T4	447 aa		13.97	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PDE2A	O00408	941 aa	Predicted RBP	13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ENC1	O14682	589 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	AQP9	O43315	295 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ZNF189	O75820	626 aa	Predicted RBP	13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	RASGRP1	O95267	797 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	TRIM16	O95361	564 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	CLDN7	O95471	211 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ATXN1L	P0C7T5	689 aa	Known RBP	13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	CTSE	P14091	401 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	TSHR	P16473	764 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	GM2A	P17900	193 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	CD68	P34810	354 aa	Predicted RBP	13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	GPR1	P46091	355 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	DAB2	P98082	770 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PTS	Q03393	145 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	SLC14A2	Q15849	920 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	PRRT3	Q5FWE3	981 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	ZNF662	Q6ZS27	426 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	RBFA	Q8N0V3	343 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	SLC25A45	Q8N413	288 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	TRIM58	Q8NG06	486 aa		13.96	□□□□□ -0.17
PCDHGC3-208	ENST00000622836	TSACC	Q96A04	125 aa	Predicted RBP	13.96	□□□□□ -0.17

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