RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 REPS2Q8NFH8 660 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 LRRC20Q8TCA0 184 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 ACO2Q99798 780 aaKnown RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 NTPCRQ9BSD7 190 aaKnown RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 ABCB10Q9NRK6 738 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 GGA3Q9NZ52 723 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 SLC9A2Q9UBY0 812 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 PAPPA2Q9BXP8 1791 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 PI15O43692 258 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 NOS1APO75052 506 aaPredicted RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 GABARAPO95166 117 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 MAP3K6O95382 1288 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 TOP3BO95985 862 aaKnown RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 PAHP00439 452 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 GOT2P00505 430 aaKnown RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 NR3C2P08235 984 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 TCN1P20061 433 aaPredicted RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 HTR1BP28222 390 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 ABCE1P61221 599 aaKnown RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 BMPR2Q13873 1038 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 ATP6AP1Q15904 470 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 PMF1Q6P1K2 205 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 TRAF7Q6Q0C0 670 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 TIFABQ6ZNK6 161 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 SPRED1Q7Z699 444 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 PTAR1Q7Z6K3 402 aaPredicted RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 UBQLNLQ8IYU4 475 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 DHRSXQ8N5I4 330 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 CNTD1Q8N815 330 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 SHCBP1Q8NEM2 672 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 CYGBQ8WWM9 190 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 SEPT1Q8WYJ6 367 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 PPWD1Q96BP3 646 aaKnown RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 ASIC4Q96FT7 647 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 C1orf74Q96LT6 269 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 BTBD2Q9BX70 525 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 NECTIN3Q9NQS3 549 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 EIF3KQ9UBQ5 218 aaKnown RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 ZNF214Q9UL59 606 aaPredicted RBP10.39□□□□□ -0.75
VPS11-207ENST00000620429 CDY2AQ9Y6F7 541 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 CDY1Q9Y6F8 540 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 PMF1-BGLAPU3KQ54 211 aa10.39□□□□□ -0.75
VPS11-207ENST00000620429 TCRBV5S1A1TA0A578 114 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 LEUTXA8MZ59 168 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 TRIM16O95361 564 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 KDELR1P24390 212 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 CYP2C18P33260 490 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 YAP1P46937 504 aaKnown RBP10.38□□□□□ -0.75
VPS11-207ENST00000620429 JAK3P52333 1124 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 RPL10AP62906 217 aaKnown RBP10.38□□□□□ -0.75
VPS11-207ENST00000620429 CLDN10P78369 228 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 ZNF33BQ06732 778 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 ENPEPQ07075 957 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 NFE2L1Q14494 772 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 SQLEQ14534 574 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 SLC9B1Q4ZJI4 515 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 ZNF600Q6ZNG1 722 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 TAS1R3Q7RTX0 852 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
VPS11-207ENST00000620429 GATAD2AQ86YP4 633 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 OFCC1Q8IZS5 231 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 TP53I13Q8NBR0 393 aaPredicted RBP10.38□□□□□ -0.75
VPS11-207ENST00000620429 FAM156AQ8NDB6 213 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 URGCPQ8TCY9 931 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 FRMD8P1Q9BZ68 369 aaPredicted RBP10.38□□□□□ -0.75
VPS11-207ENST00000620429 DSN1Q9H410 356 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 ZNF385DQ9H6B1 395 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 SPC25Q9HBM1 224 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 ACTR3BQ9P1U1 418 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 ZNF112Q9UJU3 913 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 FBXO5Q9UKT4 447 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 CXorf49A8MYA2 514 aaPredicted RBP10.38□□□□□ -0.75
VPS11-207ENST00000620429 TRDMT1O14717 391 aaKnown RBP10.38□□□□□ -0.75
VPS11-207ENST00000620429 TIPRLO75663 272 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 CDK14O94921 469 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 RASAL1O95294 804 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 CLIC3O95833 236 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 KRT7P08729 469 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 TRAPPC2P0DI81 140 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 TRAPPC2BP0DI82 140 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 PRKCHP24723 683 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 IL1R2P27930 398 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 ARRB2P32121 409 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 CSTF2P33240 577 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS11-207ENST00000620429 EVI2BP34910 448 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 TAP1Q03518 808 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 PCLAFQ15004 111 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 HADHQ16836 314 aaKnown RBP10.38□□□□□ -0.75
VPS11-207ENST00000620429 CYBRD1Q53TN4 286 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 CATSPEREQ5SY80 951 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 PRR23BQ6ZRT6 265 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 VSIG10LQ86VR7 867 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 HID1Q8IV36 788 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 LGI2Q8N0V4 545 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 OR7A2PQ8NGA2 310 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 STON2Q8WXE9 905 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 LPGAT1Q92604 370 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 GTF2H4Q92759 462 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 MUL1Q969V5 352 aa10.38□□□□□ -0.75
VPS11-207ENST00000620429 KIFC1Q9BW19 673 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms