RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 RNF34Q969K3 372 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 IGSF8Q969P0 613 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 TADA1Q96BN2 335 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 NMD3Q96D46 503 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PHF21BQ96EK2 531 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 IMP4Q96G21 291 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 SLC39A13Q96H72 371 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 DNAJC1Q96KC8 554 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CNBD2Q96M20 576 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 NSUN5Q96P11 429 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 SMIM14Q96QK8 99 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PARK7Q99497 189 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 SLC29A1Q99808 456 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 MRPL57Q9BQC6 102 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ACBD6Q9BR61 282 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 TRIM4Q9C037 500 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 UBE2OQ9C0C9 1292 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 SEMA6AQ9H2E6 1030 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ALG9Q9H6U8 611 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ARNT2Q9HBZ2 717 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 TRPC7Q9HCX4 862 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PRDM5Q9NQX1 630 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 SLC38A7Q9NVC3 462 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 EVA1BQ9NVM1 165 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 NSMCE4AQ9NXX6 385 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 RRN3Q9NYV6 651 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 GTSE1Q9NYZ3 720 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 NCKIPSDQ9NZQ3 722 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 VTI1BQ9UEU0 232 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 IPO11Q9UI26 975 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 MID2Q9UJV3 735 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 MED16Q9Y2X0 877 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 AAR2Q9Y312 384 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 TRPV2Q9Y5S1 764 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 VWA8A3KMH1 1905 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 A0A087X1B8 175 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ANKRD33BA6NCL7 494 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 MROH6A6NGR9 719 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 FXYD1O00168 92 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 TRIM38O00635 465 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 DLGAP1O14490 977 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 LDB2O43679 373 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 IPO13O94829 963 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 RTN3O95197 1032 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 SIX3O95343 332 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 TBX18O95935 607 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ODC1P11926 461 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 MTHFD2P13995 350 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 UGT1A6P19224 532 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CAPN3P20807 821 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 GPX3P22352 226 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 DNAJB1P25685 340 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PCSK1P29120 753 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ADSLP30566 484 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ZFP36L2P47974 494 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 LEPRP48357 1165 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CPT1AP50416 773 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ZNF135P52742 658 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 HK2P52789 917 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 GEMP55040 296 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 INHBCP55103 352 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CDH13P55290 713 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 RPL26P61254 145 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CAP1Q01518 475 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 POU4F1Q01851 419 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 DSC3Q14574 896 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 OR4D1Q15615 310 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 NRF1Q16656 503 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 UGP2Q16851 508 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 UNC50Q53HI1 259 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 FBXO48Q5FWF7 155 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 BRMS1LQ5PSV4 323 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 HECTD2Q5U5R9 776 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 RASIP1Q5U651 963 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ARMC3Q5W041 872 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PTCRAQ6ISU1 281 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 IYDQ6PHW0 289 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 LAYNQ6UX15 382 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CYP2R1Q6VVX0 501 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 LARP4Q71RC2 724 aaKnown RBP eCLIP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 BEND5Q7L4P6 421 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 AMIGO2Q86SJ2 522 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 SDCCAG8Q86SQ7 713 aaPredicted RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ISCA2Q86U28 154 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 SERINC5Q86VE9 423 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 LCA5Q86VQ0 697 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 SPATA24Q86W54 205 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 EPHX4Q8IUS5 362 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 OR52K2Q8NGK3 314 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 CEP70Q8NHQ1 597 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 GPR152Q8TDT2 470 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 LPGAT1Q92604 370 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 PSMG2Q969U7 264 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 ASB9Q96DX5 294 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 RPL10LQ96L21 214 aaKnown RBP4.33□□□□□ -1.72
SEC22B-202ENST00000618538 KCNA7Q96RP8 456 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 FSD1LQ9BXM9 530 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 GRIP2Q9C0E4 1043 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 TUBB1Q9H4B7 451 aa4.33□□□□□ -1.72
SEC22B-202ENST00000618538 EPB41L1Q9H4G0 881 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms