RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 TRIM60Q495X7 471 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 PKN3Q6P5Z2 889 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 KBTBD6Q86V97 674 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 SLAIN1Q8ND83 568 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 CHD7Q9P2D1 2997 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 ANXA9O76027 345 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 SEC24DO94855 1032 aaPredicted RBP14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 MYL4P12829 197 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 BMP1P13497 986 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 TSHRP16473 764 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 MAGEA6P43360 314 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 TM4SF4P48230 202 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 THOP1P52888 689 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 NSUN2Q08J23 767 aaKnown RBP eCLIP14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 TUBB3Q13509 450 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 TCTN1Q2MV58 587 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 KRT80Q6KB66 452 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 PGM2L1Q6PCE3 622 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 TMEM135Q86UB9 458 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 ZNF598Q86UK7 904 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 SNX32Q86XE0 403 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 CLVS1Q8IUQ0 354 aaPredicted RBP14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 SMYD1Q8NB12 490 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 EME1Q96AY2 570 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 MRGPRX2Q96LB1 330 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 TM6SF2Q9BZW4 377 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 ZYG11BQ9C0D3 744 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 FAM124BQ9H5Z6 455 aaPredicted RBP14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 ZBTB14O43829 449 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 TRIM13O60858 407 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 URODP06132 367 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 PSMC3P17980 439 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 PCID2Q5JVF3 399 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 TPGS1Q6ZTW0 290 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 RTL3Q8N8U3 475 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 LENG8Q96PV6 779 aaPredicted RBP14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 ALG9Q9H6U8 611 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 PCDHB8Q9UN66 801 aa14.51□□□□□ -0.09
SHROOM1-208ENST00000617339 F5P12259 2224 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 THRAP10827 490 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 COL6A2P12110 1019 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 ITGB6P18564 788 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 HARS2P49590 506 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 MTTPP55157 894 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 RBM23Q86U06 439 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 LILRA2Q8N149 483 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 TMA16Q96EY4 203 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 SLC45A3Q96JT2 553 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 RGS18Q9NS28 235 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 MARCH4Q9P2E8 410 aaPredicted RBP14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 THEGQ9P2T0 379 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 PRUNE2Q8WUY3 3088 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 SNNO75324 88 aaPredicted RBP14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 GSRP00390 522 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 RXRGP48443 463 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 NPY2RP49146 381 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 IHHQ14623 411 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 POTEHQ6S545 545 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 ZC3HC1Q86WB0 502 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 MYO1HQ8N1T3 1032 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 ABHD8Q96I13 439 aa14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 NOL6Q9H6R4 1146 aaKnown RBP14.5□□□□□ -0.09
SHROOM1-208ENST00000617339 MTSS1O43312 755 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 DENRO43583 198 aaKnown RBP14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 ALDH1A2O94788 518 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 CCL5P13501 91 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 SCAPQ12770 1279 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 SCIMPQ6UWF3 145 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 MFSD6LQ8IWD5 586 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 CARNMT1Q8N4J0 409 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 BCL7CQ8WUZ0 217 aaPredicted RBP14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 IL1RL2Q9HB29 575 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 GIMAP2Q9UG22 337 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 ZFP37Q9Y6Q3 630 aaPredicted RBP14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 MTMR11A4FU01 709 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 LRRC14BA6NHZ5 514 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 MUSKO15146 869 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 CCNCP24863 283 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 GEMP55040 296 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 ADGRE1Q14246 886 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 GPR158Q5T848 1215 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 CCSAPQ6IQ19 270 aaPredicted RBP14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 ARMCX6Q7L4S7 300 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 BBS5Q8N3I7 341 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 DDI1Q8WTU0 396 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 HEXDCQ8WVB3 486 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 CCDC68Q9H2F9 335 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 SMOC2Q9H3U7 446 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 TLR8Q9NR97 1041 aaKnown RBP14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 SSX2IPQ9Y2D8 614 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 TMEM221A6NGB7 291 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 SUPT7LO94864 414 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 ALOX15P16050 662 aaPredicted RBP14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 GKP32189 559 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 MTA1Q13330 715 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 TSTA3Q13630 321 aaPredicted RBP14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 KCTD11Q693B1 232 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 LINC00523Q86TU6 105 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 AHI1Q8N157 1196 aa14.49□□□□□ -0.09
SHROOM1-208ENST00000617339 SREK1Q8WXA9 508 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms