RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 PCDHGA3Q9Y5H0 932 aa6.69□□□□□ -1.34
LMO3-235ENST00000616247 NOTOA8MTQ0 251 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 PPP6CO00743 305 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 TRIM24O15164 1050 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 RAD51BO15315 384 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 MAFGO15525 162 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 XPNPEP2O43895 674 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 KPNA6O60684 536 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 TXNP10599 105 aaKnown RBP6.68□□□□□ -1.34
LMO3-235ENST00000616247 CYP4B1P13584 511 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 PTPN3P26045 913 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 SERPINB10P48595 397 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 HLCSP50747 726 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 KCNK10P57789 538 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 YBX1P67809 324 aaKnown RBP6.68□□□□□ -1.34
LMO3-235ENST00000616247 DAB2P98082 770 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 ADIGQ0VDE8 80 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 UGP2Q16851 508 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 INAVAQ3KP66 663 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 RBM20Q5T481 1227 aaKnown RBP6.68□□□□□ -1.34
LMO3-235ENST00000616247 UBE2UQ5VVX9 321 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 IER5Q5VY09 327 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 TBPL2Q6SJ96 375 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 CATSPER4Q7RTX7 472 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 ITIH5Q86UX2 942 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 HS3ST5Q8IZT8 346 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 LGI2Q8N0V4 545 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 MIER2Q8N344 545 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 FIG4Q92562 907 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 ITCHQ96J02 903 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 DMRTB1Q96MA1 342 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 PPM1MQ96MI6 270 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 KCNA7Q96RP8 456 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 HBEGFQ99075 208 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 TBCDQ9BTW9 1192 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 SEZ6LQ9BYH1 1024 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 REXO4Q9GZR2 422 aaKnown RBP6.68□□□□□ -1.34
LMO3-235ENST00000616247 AKTIPQ9H8T0 292 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 PRDM16Q9HAZ2 1276 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 PARVBQ9HBI1 364 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 GDAP2Q9NXN4 497 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 SCHIP1Q9P0W5 487 aaPredicted RBP6.68□□□□□ -1.34
LMO3-235ENST00000616247 TIMM22Q9Y584 194 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 SLC30A1Q9Y6M5 507 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 LRRC14BA6NHZ5 514 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 SOBPA7XYQ1 873 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 ERI2A8K979 691 aaKnown RBP6.68□□□□□ -1.34
LMO3-235ENST00000616247 HACD1B0YJ81 288 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 ZNF701M0R085 212 aaPredicted RBP6.68□□□□□ -1.34
LMO3-235ENST00000616247 PPEF2O14830 753 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 AP2A1O95782 977 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 PIGRP01833 764 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 ALDH2P05091 517 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 SBK3P0C264 359 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 MBL2P11226 248 aaPredicted RBP6.68□□□□□ -1.34
LMO3-235ENST00000616247 AGXTP21549 392 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 TUFMP49411 452 aaKnown RBP6.68□□□□□ -1.34
LMO3-235ENST00000616247 GSK3BP49841 420 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 ARPC4P59998 168 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 NSUN2Q08J23 767 aaKnown RBP eCLIP6.68□□□□□ -1.34
LMO3-235ENST00000616247 GRB7Q14451 532 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 CYBRD1Q53TN4 286 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 NOMO2Q5JPE7 1267 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 AGAP9Q5VTM2 703 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 CYS1Q717R9 158 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 THAP5Q7Z6K1 395 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 GALNT5Q7Z7M9 940 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 ZDHHC13Q8IUH4 622 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 OR10Q1Q8NGQ4 319 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 SLC2A14Q8TDB8 520 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 PPP1R13LQ8WUF5 828 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 RORBQ92753 470 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 C19orf60Q96EN9 201 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 OTUD5Q96G74 571 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 C3orf30Q96M34 536 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 CSF3RQ99062 836 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 MRPL57Q9BQC6 102 aaKnown RBP6.68□□□□□ -1.34
LMO3-235ENST00000616247 OSBPL2Q9H1P3 480 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 TP63Q9H3D4 680 aaPredicted RBP6.68□□□□□ -1.34
LMO3-235ENST00000616247 ALG2Q9H553 416 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 GIMAP4Q9NUV9 329 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 SETD4Q9NVD3 440 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 FBXO5Q9UKT4 447 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 ERVK-11Q9UQG0 969 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 ANKRD6Q9Y2G4 727 aa6.68□□□□□ -1.34
LMO3-235ENST00000616247 A8MT66 165 aa6.67□□□□□ -1.34
LMO3-235ENST00000616247 H0Y626 953 aa6.67□□□□□ -1.34
LMO3-235ENST00000616247 ACKR2O00590 384 aa6.67□□□□□ -1.34
LMO3-235ENST00000616247 SLC22A2O15244 555 aa6.67□□□□□ -1.34
LMO3-235ENST00000616247 IDH3BO43837 385 aa6.67□□□□□ -1.34
LMO3-235ENST00000616247 B4GALT4O60513 344 aa6.67□□□□□ -1.34
LMO3-235ENST00000616247 IPO13O94829 963 aaKnown RBP6.67□□□□□ -1.34
LMO3-235ENST00000616247 TRIM16O95361 564 aa6.67□□□□□ -1.34
LMO3-235ENST00000616247 VTNP04004 478 aa6.67□□□□□ -1.34
LMO3-235ENST00000616247 ENO2P09104 434 aaPredicted RBP6.67□□□□□ -1.34
LMO3-235ENST00000616247 THRBP10828 461 aa6.67□□□□□ -1.34
LMO3-235ENST00000616247 DBTP11182 482 aaKnown RBP6.67□□□□□ -1.34
LMO3-235ENST00000616247 FCGR1AP12314 374 aa6.67□□□□□ -1.34
LMO3-235ENST00000616247 CPB1P15086 417 aa6.67□□□□□ -1.34
LMO3-235ENST00000616247 CAPN3P20807 821 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms