RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PDZD8Q8NEN9 1154 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 SLC22A17Q8WUG5 538 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 TRMT2BQ96GJ1 504 aaKnown RBP13.13□□□□□ -0.31
FOXN3-219ENST00000615335 MED30Q96HR3 178 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 CCDC106Q9BWC9 280 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 LIN28AQ9H9Z2 209 aaKnown RBP13.13□□□□□ -0.31
FOXN3-219ENST00000615335 PLAC1Q9HBJ0 212 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 SMYD2Q9NRG4 433 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 DDIT4Q9NX09 232 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 MKS1Q9NXB0 559 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 ERGIC3Q9Y282 383 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 ATG2AQ2TAZ0 1938 aa13.13□□□□□ -0.31
FOXN3-219ENST00000615335 UGT1A9O60656 530 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 S100BP04271 92 aaPredicted RBP13.12□□□□□ -0.31
FOXN3-219ENST00000615335 INHBBP09529 407 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 CHRNB1P11230 501 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 CHI3L2Q15782 390 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 CA9Q16790 459 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 PGM2L1Q6PCE3 622 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 UNC5AQ6ZN44 842 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 KBTBD6Q86V97 674 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 FAM131BQ86XD5 332 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 NUDCD3Q8IVD9 361 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 MMAAQ8IVH4 418 aaKnown RBP13.12□□□□□ -0.31
FOXN3-219ENST00000615335 GSDMBQ8TAX9 411 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 ACTRT2Q8TDY3 377 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 LRRN4Q8WUT4 740 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 TRUB1Q8WWH5 349 aaKnown RBP13.12□□□□□ -0.31
FOXN3-219ENST00000615335 MRPL38Q96DV4 380 aaKnown RBP13.12□□□□□ -0.31
FOXN3-219ENST00000615335 ZNF670Q9BS34 389 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 SLC2A11Q9BYW1 496 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 UGT1A7Q9HAW7 530 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 UGT1A10Q9HAW8 530 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 UGT1A8Q9HAW9 530 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 TRPM5Q9NZQ8 1165 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 UXTQ9UBK9 157 aaPredicted RBP13.12□□□□□ -0.31
FOXN3-219ENST00000615335 SFMBT1Q9UHJ3 866 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 DPP7Q9UHL4 492 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
FOXN3-219ENST00000615335 CENPBD1B2RD01 187 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 BMP10O95393 424 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 TBX18O95935 607 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 C1RP00736 705 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 AOC1P19801 751 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 PPP6R3Q5H9R7 873 aaPredicted RBP13.12□□□□□ -0.31
FOXN3-219ENST00000615335 ZNF697Q5TEC3 545 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 OTUD1Q5VV17 481 aaPredicted RBP13.12□□□□□ -0.31
FOXN3-219ENST00000615335 ARID3BQ8IVW6 561 aaPredicted RBP13.12□□□□□ -0.31
FOXN3-219ENST00000615335 OVCA2Q8WZ82 227 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 FERMT1Q9BQL6 677 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 PIGVQ9NUD9 493 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
FOXN3-219ENST00000615335 SIRPGQ9P1W8 387 aa13.12□□□□□ -0.31
FOXN3-219ENST00000615335 CRNNQ9UBG3 495 aaPredicted RBP13.12□□□□□ -0.31
FOXN3-219ENST00000615335 CCDC195A0A1B0GUA6 201 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 ZNF840PA6NDX5 716 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 MDM4O15151 490 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 TLR5O60602 858 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 MTRF1O75570 445 aaKnown RBP13.11□□□□□ -0.31
FOXN3-219ENST00000615335 F9P00740 461 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 ZDHHC11BP0C7U3 371 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 PSMC3P17980 439 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 ATP6V0D1P61421 351 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 WASHC5Q12768 1159 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 TRIM16LQ309B1 348 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 LRIT3Q3SXY7 679 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 WDR45BQ5MNZ6 344 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 C10orf120Q5SQS8 335 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 GPR141Q7Z602 305 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 TAC4Q86UU9 113 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 TMCO5AQ8N6Q1 288 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 LILRB4Q8NHJ6 448 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 RNF34Q969K3 372 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 TAMM41Q96BW9 452 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 ISOC1Q96CN7 298 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 EBNA1BP2Q99848 306 aaKnown RBP13.11□□□□□ -0.31
FOXN3-219ENST00000615335 IGFLR1Q9H665 355 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 CCSER2Q9H7U1 834 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 COL4A4P53420 1690 aaPredicted RBP13.11□□□□□ -0.31
FOXN3-219ENST00000615335 FAM159BA6NKW6 160 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 CFAP99D6REC4 459 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 METTL18O95568 372 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 CHEK2O96017 543 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 SERPINA6P08185 405 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 ALOX5P09917 674 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 SERPINB9P50453 376 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 EFEMP1Q12805 493 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 DUSP6Q16828 381 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 OGFOD2Q6N063 350 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 RTL10Q7L3V2 364 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 CRLF3Q8IUI8 442 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 NDUFAF2Q8N183 169 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 ZNF420Q8TAQ5 688 aaPredicted RBP13.11□□□□□ -0.31
FOXN3-219ENST00000615335 TBC1D15Q8TC07 691 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 HM13Q8TCT9 377 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 SIGLEC10Q96LC7 697 aa13.11□□□□□ -0.31
FOXN3-219ENST00000615335 MOV10Q9HCE1 1003 aaKnown RBP13.11□□□□□ -0.31
FOXN3-219ENST00000615335 ZNF334Q9HCZ1 680 aaPredicted RBP13.11□□□□□ -0.31
FOXN3-219ENST00000615335 OLA1Q9NTK5 396 aaKnown RBP13.11□□□□□ -0.31
FOXN3-219ENST00000615335 TMA7Q9Y2S6 64 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms