RNA–Protein interactions for RNA: ENST00000614484.4

SRRT-215, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-215ENST00000614484 EFHC1Q5JVL4 640 aa12.08□□□□□ -0.48
SRRT-215ENST00000614484 RHBDF2Q6PJF5 856 aa12.08□□□□□ -0.48
SRRT-215ENST00000614484 CCDC149Q6ZUS6 474 aa12.08□□□□□ -0.48
SRRT-215ENST00000614484 CIR1Q86X95 450 aaPredicted RBP12.08□□□□□ -0.48
SRRT-215ENST00000614484 PJA1Q8NG27 643 aa12.08□□□□□ -0.48
SRRT-215ENST00000614484 TMA16Q96EY4 203 aaKnown RBP12.08□□□□□ -0.48
SRRT-215ENST00000614484 ZFYVE19Q96K21 471 aa12.08□□□□□ -0.48
SRRT-215ENST00000614484 UNKQ9C0B0 810 aaKnown RBP12.08□□□□□ -0.48
SRRT-215ENST00000614484 FBXO44Q9H4M3 255 aa12.08□□□□□ -0.48
SRRT-215ENST00000614484 TLR8Q9NR97 1041 aaKnown RBP12.08□□□□□ -0.48
SRRT-215ENST00000614484 TAS2R1Q9NYW7 299 aa12.08□□□□□ -0.48
SRRT-215ENST00000614484 LAMP5Q9UJQ1 280 aa12.08□□□□□ -0.48
SRRT-215ENST00000614484 GRID1Q9ULK0 1009 aa12.08□□□□□ -0.48
SRRT-215ENST00000614484 MRPS23Q9Y3D9 190 aaKnown RBP12.08□□□□□ -0.48
SRRT-215ENST00000614484 EXOC1LA0A1B0GW35 172 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 WDR91A4D1P6 747 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 TSPAN3O60637 253 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 OR6B1O95007 311 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 CSH1P0DML2 217 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 CSH2P0DML3 217 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 MBL2P11226 248 aaPredicted RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 IL10P22301 178 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 RPA3P35244 121 aaPredicted RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 SLC26A3P40879 764 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 NR1H3Q13133 447 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 KCNJ8Q15842 424 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 GPR158Q5T848 1215 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 RNASEH2BQ5TBB1 312 aaKnown RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 OTUD1Q5VV17 481 aaPredicted RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 SLC26A9Q7LBE3 791 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 TRABD2AQ86V40 505 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 SATL1Q86VE3 508 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 CFAP52Q8N1V2 620 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 DENND1AQ8TEH3 1009 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 DGCR14Q96DF8 476 aaKnown RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 PTCD3Q96EY7 689 aaKnown RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 GAS2L1Q99501 681 aaPredicted RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 DHX35Q9H5Z1 703 aaKnown RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 C10orf88Q9H8K7 445 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 MARCH7Q9H992 704 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.07□□□□□ -0.48
SRRT-215ENST00000614484 MARCH2Q9P0N8 246 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 TYW5A2RUC4 315 aaKnown RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 FADS2P1A8MWK0 482 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 FAM72CH0Y354 149 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 CIB2O75838 187 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 FOSL2P15408 326 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 CEBPBP17676 345 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 PSMA4P25789 261 aaKnown RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 CRABP2P29373 138 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 CHRNEQ04844 493 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 CDC16Q13042 620 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 SQLEQ14534 574 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 SLC1A5Q15758 541 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 FAM72AQ5TYM5 149 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 FAM72DQ6L9T8 149 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 C11orf63Q6NUN7 778 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 MON1AQ86VX9 555 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 FAM72BQ86X60 149 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 CPSF7Q8N684 471 aaKnown RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 RFWD2Q8NHY2 731 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 PYROXD1Q8WU10 500 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 STON2Q8WXE9 905 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 ZNF707Q96C28 371 aaPredicted RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 SLC46A2Q9BY10 475 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 TKTL2Q9H0I9 626 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 EPB41L1Q9H4G0 881 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 EBF3Q9H4W6 596 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 MRPL39Q9NYK5 338 aaKnown RBP12.07□□□□□ -0.48
SRRT-215ENST00000614484 ERVK-11Q9UQG0 969 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 SCML2Q9UQR0 700 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 IFT52Q9Y366 437 aa12.07□□□□□ -0.48
SRRT-215ENST00000614484 H7C0C1 242 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 E2F3O00716 465 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 TP73O15350 636 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 GAS8O95995 478 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 ZNF143P52747 638 aaPredicted RBP12.06□□□□□ -0.48
SRRT-215ENST00000614484 MED21Q13503 144 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 Q3ZCU0 254 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 PM20D1Q6GTS8 502 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 SYCE2Q6PIF2 218 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 ACAD11Q709F0 780 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 RASSF3Q86WH2 238 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 DENND1CQ8IV53 801 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 SPATA18Q8TC71 538 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 ZNF398Q8TD17 642 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 IL21Q9HBE4 155 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 SDHAF3Q9NRP4 125 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 UCKL1Q9NWZ5 548 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 UVRAGQ9P2Y5 699 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 ZNHIT2Q9UHR6 403 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 USP18Q9UMW8 372 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 SMG5Q9UPR3 1016 aaKnown RBP12.06□□□□□ -0.48
SRRT-215ENST00000614484 MFHAS1Q9Y4C4 1052 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 PRPF4O43172 522 aaKnown RBP eCLIP12.06□□□□□ -0.48
SRRT-215ENST00000614484 PROSCO94903 275 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 PTPN9P43378 593 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 MAPKAPK2P49137 400 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 CAV1Q03135 178 aa12.06□□□□□ -0.48
SRRT-215ENST00000614484 TPGS1Q6ZTW0 290 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms