RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 MPSTP25325 297 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PGFP49763 221 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RPL14P50914 215 aaKnown RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CLCN5P51795 746 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PRKCZQ05513 592 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RFTN1Q14699 578 aaPredicted RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PRR23BQ6ZRT6 265 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PATL1Q86TB9 770 aaKnown RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 OFCC1Q8IZS5 231 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 FBXW8Q8N3Y1 598 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 LRTOMTQ8WZ04 291 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GATA5Q9BWX5 397 aaPredicted RBP10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MFSD1Q9H3U5 465 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TLK1Q9UKI8 766 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CDC14AQ9UNH5 594 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ACOT9Q9Y305 439 aa10.89□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PDLIM1O00151 329 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CASQ2O14958 399 aaPredicted RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 HDAC3O15379 428 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 B4GALT3O60512 393 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SUOXP51687 545 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PHEXP78562 749 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 XIAPP98170 497 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MBTPS1Q14703 1052 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 LRRC8EQ6NSJ5 796 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 C14orf80Q86SX3 495 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TMEM126BQ8IUX1 230 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 FAM47BQ8NA70 645 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SPPL2BQ8TCT7 592 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CELF6Q96J87 481 aaKnown RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 FAR2Q96K12 515 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 UBXN10Q96LJ8 280 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ARHGAP39Q9C0H5 1083 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PCDH12Q9NPG4 1184 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RBM22Q9NW64 420 aaKnown RBP eCLIP10.88□□□□□ -0.673e-8■■■■□ 23.3
SENP3-EIF4A1-201ENST00000614237 IPO11Q9UI26 975 aaKnown RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TANC1Q9C0D5 1861 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 C1orf232A0A0U1RR37 186 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TMEM233B4DJY2 109 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 DFFAO00273 331 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PLOD2O00469 737 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TNFAIP8O95379 198 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TPH1P17752 444 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CASP2P42575 452 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PSMD8P48556 350 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 EIF2B2P49770 351 aaKnown RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CLCN2P51788 898 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TBX4P57082 545 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NFKB2Q00653 900 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 IRF9Q00978 393 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GPR17Q13304 367 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SLC39A12Q504Y0 691 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TSTD2Q5T7W7 516 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MFSD6LQ8IWD5 586 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 MRPL46Q9H2W6 279 aaKnown RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NOL11Q9H8H0 719 aaKnown RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PRPF19Q9UMS4 504 aaKnown RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ZNF510Q9Y2H8 683 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RNF103-CHMP3A0A140T963 221 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 HSPA1AP0DMV8 641 aaKnown RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 HSPA1BP0DMV9 641 aaKnown RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PIM1P11309 404 aaPredicted RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CD9P21926 228 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PBX3P40426 434 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CD151P48509 253 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TMED10P49755 219 aaKnown RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PFKPQ01813 784 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 BNIP3Q12983 259 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 KLF10Q13118 480 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ITGADQ13349 1161 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PSMD5Q16401 504 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 IL23RQ5VWK5 629 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 RWDD4Q6NW29 188 aaKnown RBP10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ZNF280BQ86YH2 543 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 LSMEM2Q8N112 164 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 LILRA2Q8N149 483 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SPATA22Q8NHS9 363 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ARRDC2Q8TBH0 407 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 C19orf43Q9BQ61 176 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 FICDQ9BVA6 458 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 COQ10BQ9H8M1 238 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PDFQ9HBH1 243 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 CYP4F12Q9HCS2 524 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 IGSF5Q9NSI5 407 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 NDFIP2Q9NV92 336 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ZDHHC7Q9NXF8 308 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GTSE1Q9NYZ3 720 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 EPS15L1Q9UBC2 864 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 SH3GLB1Q9Y371 365 aa10.88□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ATP6AP2A0A1C7CYW4 349 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PHGDHO43175 533 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GRID2O43424 1007 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TIPRLO75663 272 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ATP6AP2O75787 350 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PRKAR2AP13861 404 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 STMN1P16949 149 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 PLK1P53350 603 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 GNA12Q03113 381 aa10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 ELAVL2Q12926 359 aaKnown RBP10.87□□□□□ -0.67
SENP3-EIF4A1-201ENST00000614237 TRIM32Q13049 653 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms