RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 CPNE5Q9HCH3 593 aa17.77■□□□□ 0.44
MUC1-224ENST00000611577 MUSKO15146 869 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 CSO75390 466 aaKnown RBP17.76■□□□□ 0.43
MUC1-224ENST00000611577 PCDH8O95206 1070 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 JCHAINP01591 159 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 GIMD1P0DJR0 217 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 ADRB3P13945 408 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 HNRNPA2B1P22626 353 aaKnown RBP17.76■□□□□ 0.43
MUC1-224ENST00000611577 CLDN2P57739 230 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 RHDQ02161 417 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 ZNF284Q2VY69 593 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 ZNF569Q5MCW4 686 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 ARHGAP40Q5TG30 622 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 NEK5Q6P3R8 708 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 B4GALNT4Q76KP1 1039 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 PARS2Q7L3T8 475 aaKnown RBP17.76■□□□□ 0.43
MUC1-224ENST00000611577 TTC7BQ86TV6 843 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 LSMEM2Q8N112 164 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 TTC13Q8NBP0 860 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 PDCD6IPQ8WUM4 868 aaKnown RBP17.76■□□□□ 0.43
MUC1-224ENST00000611577 KCNE4Q8WWG9 221 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 APOLD1Q96LR9 279 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 ZNF641Q96N77 438 aaPredicted RBP17.76■□□□□ 0.43
MUC1-224ENST00000611577 SEMA3CQ99985 751 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 MGME1Q9BQP7 344 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 SUV39H2Q9H5I1 410 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 NLGN3Q9NZ94 848 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 AMACRQ9UHK6 382 aa17.76■□□□□ 0.43
MUC1-224ENST00000611577 TTC24A2A3L6 582 aaPredicted RBP17.75■□□□□ 0.43
MUC1-224ENST00000611577 HACD1B0YJ81 288 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 J3QKU1 62 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 RNF103O00237 685 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 MTSS1O43312 755 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 DXOO77932 396 aaKnown RBP17.75■□□□□ 0.43
MUC1-224ENST00000611577 GP1BAP07359 652 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 EIF3EP60228 445 aaKnown RBP17.75■□□□□ 0.43
MUC1-224ENST00000611577 IFI35P80217 286 aaPredicted RBP17.75■□□□□ 0.43
MUC1-224ENST00000611577 OTUD4Q01804 1114 aaKnown RBP17.75■□□□□ 0.43
MUC1-224ENST00000611577 ZNF542PQ5EBM4 170 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 RALGPS1Q5JS13 557 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 GCNT7Q6ZNI0 430 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 PTAR1Q7Z6K3 402 aaPredicted RBP17.75■□□□□ 0.43
MUC1-224ENST00000611577 CAMK1DQ8IU85 385 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 REXO1L1PQ8IX06 675 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 SLC22A18ASQ8N1D0 253 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 PGBD5Q8N414 524 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 TEX26Q8N6G2 289 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 RAB7BQ96AH8 199 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 ABCG4Q9H172 646 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 POLR1BQ9H9Y6 1135 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 EVA1BQ9NVM1 165 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 PYCARDQ9ULZ3 195 aa17.75■□□□□ 0.43
MUC1-224ENST00000611577 MAST4O15021 2626 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 KLK10O43240 276 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 HLA-DQB2P05538 268 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 CA4P22748 312 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 CES1P23141 567 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 LSSP48449 732 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 DUSP3P51452 185 aaPredicted RBP17.74■□□□□ 0.43
MUC1-224ENST00000611577 XRCC4Q13426 336 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 PRKD1Q15139 912 aaPredicted RBP17.74■□□□□ 0.43
MUC1-224ENST00000611577 NOMO1Q15155 1222 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 SEL1L3Q68CR1 1132 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 DARS2Q6PI48 645 aaKnown RBP17.74■□□□□ 0.43
MUC1-224ENST00000611577 BRAT1Q6PJG6 821 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 ABI3BPQ7Z7G0 1075 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 CDKL3Q8IVW4 592 aaPredicted RBP17.74■□□□□ 0.43
MUC1-224ENST00000611577 ACTL9Q8TC94 416 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 MAPK15Q8TD08 544 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 AGAP3Q96P47 875 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 QKIQ96PU8 341 aaKnown RBP eCLIP17.74■□□□□ 0.43
MUC1-224ENST00000611577 CEP41Q9BYV8 373 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 CARD9Q9H257 536 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 USP29Q9HBJ7 922 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 NOD2Q9HC29 1040 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 DNAJC28Q9NX36 388 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 DKK3Q9UBP4 350 aa17.74■□□□□ 0.43
MUC1-224ENST00000611577 ZFR2Q9UPR6 939 aaKnown RBP17.74■□□□□ 0.43
MUC1-224ENST00000611577 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.74■□□□□ 0.43
MUC1-224ENST00000611577 LY6G6EA0A0G2JKS1 128 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 NEMP2A6NFY4 417 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 A6NNZ2 444 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 K7ESM1 405 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 STK10O94804 968 aaKnown RBP17.73■□□□□ 0.43
MUC1-224ENST00000611577 NFKBIAP25963 317 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 ERVPABLB-1P60509 514 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 POLR2LP62875 67 aaKnown RBP17.73■□□□□ 0.43
MUC1-224ENST00000611577 DSC2Q02487 901 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 ZBTB17Q13105 803 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 ERAP2Q6P179 960 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 Q6ZSR6 202 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 FAM181AQ8N9Y4 354 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 IFI44Q8TCB0 444 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 HCAR2Q8TDS4 363 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 IFT43Q96FT9 208 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 WBP1Q96G27 269 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 IL12RB2Q99665 862 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 FAM118BQ9BPY3 351 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 HERPUD2Q9BSE4 406 aa17.73■□□□□ 0.43
MUC1-224ENST00000611577 DUSP23Q9BVJ7 150 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms