RNA–Protein interactions for RNA: ENST00000608674.5

TOM1-218, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-218ENST00000608674 TCEA3O75764 348 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 MAP3K6O95382 1288 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 MPOP05164 745 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 CA4P22748 312 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 CCNCP24863 283 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 EIF2S3P41091 472 aaKnown RBP13.24□□□□□ -0.29
TOM1-218ENST00000608674 ETV3P41162 512 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 TAS2R40P59535 323 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 GABREP78334 506 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 ISXQ2M1V0 245 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 TBC1D25Q3MII6 688 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 ODF2Q5BJF6 829 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 PERM1Q5SV97 790 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 KYQ8NBH2 561 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 CCNYQ8ND76 341 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 OR6C4Q8NGE1 309 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 SLC35G2Q8TBE7 412 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 SCRN2Q96FV2 425 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 RBM15Q96T37 977 aaKnown RBP eCLIP13.24□□□□□ -0.29
TOM1-218ENST00000608674 CCDC3Q9BQI4 270 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 NHEJ1Q9H9Q4 299 aaPredicted RBP13.24□□□□□ -0.29
TOM1-218ENST00000608674 POLR1BQ9H9Y6 1135 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 CYP4F12Q9HCS2 524 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 FGF22Q9HCT0 170 aa13.24□□□□□ -0.29
TOM1-218ENST00000608674 FASNP49327 2511 aaKnown RBP13.23□□□□□ -0.29
TOM1-218ENST00000608674 LRRD1A4D1F6 860 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 NPIPB15A6NHN6 443 aaPredicted RBP13.23□□□□□ -0.29
TOM1-218ENST00000608674 PSMD11O00231 422 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 MFAP3LO75121 409 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 MYCLP1P12525 358 aaPredicted RBP13.23□□□□□ -0.29
TOM1-218ENST00000608674 CCNB1P14635 433 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 CTPS1P17812 591 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 GM2AP17900 193 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 ARHGAP25P42331 645 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 LSSP48449 732 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 SPIDRQ14159 915 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 RAET1GQ6H3X3 334 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 HSD11B1LQ7Z5J1 315 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 CNGA4Q8IV77 575 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 RHOT2Q8IXI1 618 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 FAM46DQ8NEK8 389 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 SNIP1Q8TAD8 396 aaKnown RBP13.23□□□□□ -0.29
TOM1-218ENST00000608674 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.23□□□□□ -0.29
TOM1-218ENST00000608674 PIH1D2Q8WWB5 315 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 RAPGEF5Q92565 580 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 MAML1Q92585 1016 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 FAF2Q96CS3 445 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 DTD2Q96FN9 168 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 ZNF578Q96N58 590 aaPredicted RBP13.23□□□□□ -0.29
TOM1-218ENST00000608674 TSGA13Q96PP4 275 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 MCCC1Q96RQ3 725 aaPredicted RBP13.23□□□□□ -0.29
TOM1-218ENST00000608674 CHP1Q99653 195 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 LGR4Q9BXB1 951 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 MAK16Q9BXY0 300 aaKnown RBP13.23□□□□□ -0.29
TOM1-218ENST00000608674 SUDS3Q9H7L9 328 aaPredicted RBP13.23□□□□□ -0.29
TOM1-218ENST00000608674 MRPL40Q9NQ50 206 aaKnown RBP13.23□□□□□ -0.29
TOM1-218ENST00000608674 SPTLC3Q9NUV7 552 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 AMACRQ9UHK6 382 aa13.23□□□□□ -0.29
TOM1-218ENST00000608674 RP1P56715 2156 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 PTPRQQ9UMZ3 2332 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 PRSS38A1L453 326 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 AKR1B15C9JRZ8 316 aaPredicted RBP13.22□□□□□ -0.29
TOM1-218ENST00000608674 PDHA1P08559 390 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 LHCGRP22888 699 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 KDELR1P24390 212 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 RBMS1P29558 406 aaKnown RBP13.22□□□□□ -0.29
TOM1-218ENST00000608674 DSC2Q02487 901 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 GBE1Q04446 702 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 CCDC173Q0VFZ6 552 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 C3orf38Q5JPI3 329 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 KCTD16Q68DU8 428 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 Q6ZVL8 140 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 TSPAN33Q86UF1 283 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 HEATR4Q86WZ0 1026 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 CCDC13Q8IYE1 715 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 PELI3Q8N2H9 469 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 PQLC3Q8N755 202 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 FATE1Q969F0 183 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 CCDC74AQ96AQ1 378 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 ATXN7L3BQ96GX2 97 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 RNF157Q96PX1 679 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 GFM1Q96RP9 751 aaKnown RBP13.22□□□□□ -0.29
TOM1-218ENST00000608674 TMEM168Q9H0V1 697 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 DPEP2Q9H4A9 486 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 CARS2Q9HA77 564 aaKnown RBP13.22□□□□□ -0.29
TOM1-218ENST00000608674 DNPEPQ9ULA0 475 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 PPIL1Q9Y3C6 166 aa13.22□□□□□ -0.29
TOM1-218ENST00000608674 MYLKQ15746 1914 aa13.21□□□□□ -0.29
TOM1-218ENST00000608674 B4DGG1 531 aa13.21□□□□□ -0.29
TOM1-218ENST00000608674 JCHAINP01591 159 aa13.21□□□□□ -0.29
TOM1-218ENST00000608674 ZNF30P17039 623 aa13.21□□□□□ -0.29
TOM1-218ENST00000608674 ITPKBP27987 946 aa13.21□□□□□ -0.29
TOM1-218ENST00000608674 GPR1P46091 355 aa13.21□□□□□ -0.29
TOM1-218ENST00000608674 PCBP4P57723 403 aaKnown RBP13.21□□□□□ -0.29
TOM1-218ENST00000608674 ILF3Q12906 894 aaKnown RBP eCLIP13.21□□□□□ -0.29
TOM1-218ENST00000608674 PTPRRQ15256 657 aa13.21□□□□□ -0.29
TOM1-218ENST00000608674 LRRC66Q68CR7 880 aa13.21□□□□□ -0.29
TOM1-218ENST00000608674 ALG1LQ6GMV1 187 aa13.21□□□□□ -0.29
TOM1-218ENST00000608674 FOXR1Q6PIV2 292 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms