RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 CAMK1DQ8IU85 385 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 LIX1LQ8IVB5 337 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 HACE1Q8IYU2 909 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 MCOLN2Q8IZK6 566 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PDIK1LQ8N165 341 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PARP8Q8N3A8 854 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TOR1AIP2Q8NFQ8 470 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 BEST2Q8NFU1 509 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ABHD11Q8NFV4 315 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 GSDMBQ8TAX9 411 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TTC17Q96AE7 1141 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 LRRC59Q96AG4 307 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 VPS33AQ96AX1 596 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PGBD4Q96DM1 585 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ASB9Q96DX5 294 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 NRBF2Q96F24 287 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 LCORQ96JN0 433 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 MAELQ96JY0 434 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 FAR2Q96K12 515 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 UBXN10Q96LJ8 280 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF512Q96ME7 567 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SORCS2Q96PQ0 1159 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SORT1Q99523 831 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 LBHD1Q9BQE6 289 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 HERPUD2Q9BSE4 406 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 C17orf80Q9BSJ5 609 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 C11orf84Q9BUA3 381 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TRAF4Q9BUZ4 470 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 KRTAP17-1Q9BYP8 105 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF385DQ9H6B1 395 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SMYD3Q9H7B4 428 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 COPS7BQ9H9Q2 264 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 EFCAB1Q9HAE3 211 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SIAEQ9HAT2 523 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 MRM3Q9HC36 420 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SYTL2Q9HCH5 934 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 MRPL47Q9HD33 250 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 UBE2TQ9NPD8 197 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 DNAJC17Q9NVM6 304 aaKnown RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 STMN3Q9NZ72 180 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 MARCH2Q9P0N8 246 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 LRP2BPQ9P2M1 347 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TBC1D14Q9P2M4 693 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 UBA2Q9UBT2 640 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 DCDC2Q9UHG0 476 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 VPS51Q9UID3 782 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 DAPK2Q9UIK4 370 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PPT2Q9UMR5 302 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 CDC14AQ9UNH5 594 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZBTB1Q9Y2K1 713 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SIT1Q9Y3P8 196 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 RAD54BQ9Y620 910 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 TEX264Q9Y6I9 313 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 A3GALT2U3KPV4 340 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PLIN4Q96Q06 1357 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PAPPAQ13219 1627 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 SCN7AQ01118 1682 aa4.1□□□□□ -1.75
HMGB1P50-201ENST00000605814 PTPRFP10586 1907 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 C1orf232A0A0U1RR37 186 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 NPEPPSL1A6NEC2 478 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SAGE2PA6NJ88 616 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TSPY2A6NKD2 308 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SAC3D1A6NKF1 404 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 FAM25AB3EWG3 89 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 FAM25CB3EWG5 89 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 FAM25GB3EWG6 89 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ERVV-1B6SEH8 477 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TCP10L2B9ZVM9 353 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLCO1B7G3V0H7 640 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 TAF4O00268 1085 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 DLGAP1O14490 977 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 LAMTOR5O43504 91 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC37A4O43826 429 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 B4GALT4O60513 344 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 UGT2B11O75310 529 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 AVILO75366 819 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 H2AFYO75367 372 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 RFPL2O75678 378 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SGPL1O95470 568 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 FYNP06241 537 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 INHBAP08476 426 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 WEE2P0C1S8 567 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 FGF3P11487 239 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ITIH1P19827 911 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 GLRA2P23416 452 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ACVR2AP27037 513 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 EPHA3P29320 983 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 RCVRNP35243 200 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 GRK3P35626 688 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ZNF76P36508 570 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ARCN1P48444 511 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 SLC1A6P48664 564 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 ADCY7P51828 1080 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 PPP5CP53041 499 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 B2MP61769 119 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 MRPS5P82675 430 aaKnown RBP4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 PPP2R2BQ00005 443 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 MS4A2Q01362 244 aa4.09□□□□□ -1.75
HMGB1P50-201ENST00000605814 MYL7Q01449 175 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms