RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ACOX1Q15067 660 aa18.01■□□□□ 0.47
CHMP2A-208ENST00000601220 ASIC2Q16515 512 aa18.01■□□□□ 0.47
CHMP2A-208ENST00000601220 ZSCAN23Q3MJ62 389 aa18.01■□□□□ 0.47
CHMP2A-208ENST00000601220 PTCD2Q8WV60 388 aaKnown RBP18.01■□□□□ 0.47
CHMP2A-208ENST00000601220 MED8Q96G25 268 aa18.01■□□□□ 0.47
CHMP2A-208ENST00000601220 NUDCD1Q96RS6 583 aa18.01■□□□□ 0.47
CHMP2A-208ENST00000601220 BPIFA3Q9BQP9 254 aa18.01■□□□□ 0.47
CHMP2A-208ENST00000601220 FRMD8Q9BZ67 464 aaPredicted RBP18.01■□□□□ 0.47
CHMP2A-208ENST00000601220 ISCUQ9H1K1 167 aa18.01■□□□□ 0.47
CHMP2A-208ENST00000601220 NOD2Q9HC29 1040 aa18.01■□□□□ 0.47
CHMP2A-208ENST00000601220 ASH1LQ9NR48 2969 aaKnown RBP18.01■□□□□ 0.47
CHMP2A-208ENST00000601220 A0A1W2PQC6 194 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 B4DGG1 531 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 B8ZZF3 427 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 SOCS5O75159 536 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 MYCLP1P12525 358 aaPredicted RBP18■□□□□ 0.47
CHMP2A-208ENST00000601220 ITIH1P19827 911 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 VIPR1P32241 457 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 ETV5P41161 510 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 TRAF2Q12933 501 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 PTPRRQ15256 657 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 CCDC183Q5T5S1 534 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 TXNRD3NBQ6F5E7 133 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 ZNF438Q7Z4V0 828 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 HSD11B1LQ7Z5J1 315 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 EXD3Q8N9H8 876 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 ZNF653Q96CK0 615 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 NAP1L5Q96NT1 182 aaPredicted RBP18■□□□□ 0.47
CHMP2A-208ENST00000601220 GBP4Q96PP9 640 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 MGME1Q9BQP7 344 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 DPEP2Q9H4A9 486 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 ZWILCHQ9H900 591 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 PISDQ9UG56 409 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 PPIL1Q9Y3C6 166 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 TENM4Q6N022 2769 aa18■□□□□ 0.47
CHMP2A-208ENST00000601220 A0A1W2PQ67 120 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 J3QKU1 62 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 PDE2AO00408 941 aaPredicted RBP17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 SKILP12757 684 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 CCNB1P14635 433 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 HSPA9P38646 679 aaKnown RBP17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 ETV3P41162 512 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 NR1D2Q14995 579 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 TSR1Q2NL82 804 aaKnown RBP17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 LINC00303Q3SY05 128 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 ANO6Q4KMQ2 910 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 BOLA3Q53S33 107 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 ZNF574Q6ZN55 896 aaPredicted RBP17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 JAMLQ86YT9 394 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 TMEM159Q96B96 161 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 NUS1Q96E22 293 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 DTD2Q96FN9 168 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 CSPG4P5Q96PW8 444 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 MCCC1Q96RQ3 725 aaPredicted RBP17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 SEMA6CQ9H3T2 930 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 CARS2Q9HA77 564 aaKnown RBP17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 FOXJ2Q9P0K8 574 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 TMEM63CQ9P1W3 806 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 PHTF1Q9UMS5 762 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 SCINQ9Y6U3 715 aa17.99■□□□□ 0.47
CHMP2A-208ENST00000601220 COL6A6A6NMZ7 2263 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 PRAMEF33A0A0G2JMD5 474 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 A0A1B0GTH6 734 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 C9orf172C9J069 976 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 H3BRJ5 948 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 PRAMEF10O60809 474 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 CPP00450 1065 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 JMJD7P0C870 316 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 MYBL1P10243 752 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 RARAP10276 462 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 TEAD1P28347 426 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 MAZP56270 477 aaKnown RBP17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 CDK3Q00526 305 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 KLHL30Q0D2K2 578 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 ARHGEF7Q14155 803 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 SMTNL2Q2TAL5 461 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 TECPR1Q7Z6L1 1165 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 HEATR4Q86WZ0 1026 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 DTX1Q86Y01 620 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 PIH1D2Q8WWB5 315 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 SCRN2Q96FV2 425 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 SCARF2Q96GP6 870 aaPredicted RBP17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 TRNAU1APQ9NX07 287 aaKnown RBP17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 KCTD5Q9NXV2 234 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 TAAR2Q9P1P5 351 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 MYO1AQ9UBC5 1043 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 SLC17A4Q9Y2C5 497 aa17.98■□□□□ 0.47
CHMP2A-208ENST00000601220 NPIPB15A6NHN6 443 aaPredicted RBP17.97■□□□□ 0.47
CHMP2A-208ENST00000601220 PSMD11O00231 422 aa17.97■□□□□ 0.47
CHMP2A-208ENST00000601220 FZD6O60353 706 aa17.97■□□□□ 0.47
CHMP2A-208ENST00000601220 PGLSO95336 258 aa17.97■□□□□ 0.47
CHMP2A-208ENST00000601220 SOD1P00441 154 aa17.97■□□□□ 0.47
CHMP2A-208ENST00000601220 LIPCP11150 499 aa17.97■□□□□ 0.47
CHMP2A-208ENST00000601220 KRT10P13645 584 aa17.97■□□□□ 0.47
CHMP2A-208ENST00000601220 IL4RP24394 825 aa17.97■□□□□ 0.47
CHMP2A-208ENST00000601220 POLD2P49005 469 aa17.97■□□□□ 0.47
CHMP2A-208ENST00000601220 OR1D5P58170 312 aa17.97■□□□□ 0.47
CHMP2A-208ENST00000601220 MAXP61244 160 aa17.97■□□□□ 0.47
CHMP2A-208ENST00000601220 ZNF235Q14590 738 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms