RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	GLOD4	Q9HC38	313 aa		13.48	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	SEPT10	Q9P0V9	454 aa		13.48	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	SPAST	Q9UBP0	616 aa		13.48	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TRIM10	Q9UDY6	481 aa		13.48	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	KLK13	Q9UKR3	277 aa		13.48	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	MSRB2	Q9Y3D2	182 aa		13.48	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ADGRG1	Q9Y653	693 aa		13.48	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	COL5A1	P20908	1838 aa	Predicted RBP	13.48	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	AKAP13	Q12802	2813 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	MACROD2	A1Z1Q3	448 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CAPN8	A6NHC0	703 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	HACD1	B0YJ81	288 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ANKRD66	B4E2M5	251 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	APOC4-APOC2	K7ER74	178 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517		K7ESM1	405 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CACNB4	O00305	520 aa	Predicted RBP	13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TPP1	O14773	563 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	FFAR2	O15552	330 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	GCAT	O75600	419 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	APOC2	P02655	101 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PYGM	P11217	842 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ZNF30	P17039	623 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ACP1	P24666	158 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PTPN3	P26045	913 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TEAD1	P28347	426 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ACADVL	P49748	655 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	BLK	P51451	505 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	HK3	P52790	923 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	KIAA1024L	P59773	190 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	DPT	Q07507	201 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ILK	Q13418	452 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	XRCC4	Q13426	336 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	SMAD1	Q15797	465 aa	Known RBP	13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	SLC14A2	Q15849	920 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CDKN3	Q16667	212 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	QPCT	Q16769	361 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ALG11	Q2TAA5	492 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	HS1BP3	Q53T59	392 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	FAXC	Q5TGI0	409 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	LRRC66	Q68CR7	880 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	DENND2C	Q68D51	928 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TMPRSS7	Q7RTY8	843 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PEX26	Q7Z412	305 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	NLRP8	Q86W28	1048 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	RAVER1	Q8IY67	606 aa	Known RBP	13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	SYCE1	Q8N0S2	351 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	RBFA	Q8N0V3	343 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PELI3	Q8N2H9	469 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	RNF10	Q8N5U6	811 aa	Known RBP	13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	FAM181A	Q8N9Y4	354 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	LPCAT1	Q8NF37	534 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	LMX1A	Q8TE12	382 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ALG3	Q92685	438 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TSACC	Q96A04	125 aa	Predicted RBP	13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	NUS1	Q96E22	293 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	WDR92	Q96MX6	357 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TRIB3	Q96RU7	358 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	RBM15	Q96T37	977 aa	Known RBP eCLIP	13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	HERPUD2	Q9BSE4	406 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	DUSP23	Q9BVJ7	150 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TEX101	Q9BY14	249 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ADGRE3	Q9BY15	652 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	OSBPL8	Q9BZF1	889 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	SLC13A1	Q9BZW2	595 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	APOBEC3B	Q9UH17	382 aa	Known RBP	13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	AMFR	Q9UKV5	643 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	DNPEP	Q9ULA0	475 aa		13.47	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517		A0A0U1RQS6	177 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TMEM202	A6NGA9	273 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	MIF4GD	A9UHW6	222 aa	Known RBP	13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	LMO7DN	F2Z398	122 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PDE2A	O00408	941 aa	Predicted RBP	13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TNFRSF10C	O14798	259 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ARHGAP6	O43182	974 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	RASGRP1	O95267	797 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CKMT1A	P12532	417 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TSHR	P16473	764 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	KEL	P23276	732 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CETN2	P41208	172 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	STC1	P52823	247 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	SRP54	P61011	504 aa	Known RBP	13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CDK18	Q07002	472 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	C1orf61	Q13536	156 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	CCDC157	Q569K6	752 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	PRRT3	Q5FWE3	981 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ZC3H18	Q86VM9	953 aa	Known RBP	13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	HID1	Q8IV36	788 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	OR56A4	Q8NGH8	313 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	HTR3C	Q8WXA8	447 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	HAUS1	Q96CS2	278 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	APOLD1	Q96LR9	279 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	VAT1	Q99536	393 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	MLPH	Q9BV36	600 aa	Predicted RBP	13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	LRRC61	Q9BV99	259 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	LGR4	Q9BXB1	951 aa		13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.46	□□□□□ -0.25
ARHGEF1-222	ENST00000600517	ABCG8	Q9H221	673 aa		13.46	□□□□□ -0.25

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