RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 GLE1Q53GS7 698 aaKnown RBP20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 LPCAT2Q7L5N7 544 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 C11orf74Q86VG3 221 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 HOOK3Q86VS8 718 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 SERPINB12Q96P63 405 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 GPR63Q9BZJ6 419 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 ZFYVE1Q9HBF4 777 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 HACD3Q9P035 362 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 WHRNQ9P202 907 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 ANAPC5Q9UJX4 755 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 KCTD3Q9Y597 815 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 ARL5AQ9Y689 179 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 SLCO1B1Q9Y6L6 691 aa20.02■□□□□ 0.8
SHKBP1-222ENST00000600320 CEP192Q8TEP8 1941 aa20.02■□□□□ 0.79
SHKBP1-222ENST00000600320 THADAQ6YHU6 1953 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 PSMD11O00231 422 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 RAD51BO15315 384 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 SLC31A1O15431 190 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 LZTS3O60299 673 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 RECQL5O94762 991 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 PAK4O96013 591 aaPredicted RBP20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 ZNF30P17039 623 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 MGAT1P26572 445 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 MAOBP27338 520 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 GUCY2DQ02846 1103 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 ACOX1Q15067 660 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 TEX35Q5T0J7 233 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 ZDHHC24Q6UX98 284 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 Q6ZVL8 140 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 GLT6D1Q7Z4J2 308 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 TECPR1Q7Z6L1 1165 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 AGGF1Q8N302 714 aaeCLIP20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 BRSK1Q8TDC3 778 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 SEC14L1Q92503 715 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 SNX19Q92543 992 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 ZC3H10Q96K80 434 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 SRPK1Q96SB4 655 aaKnown RBP20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 SLC17A9Q9BYT1 436 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 TRABDQ9H4I3 376 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 FZD3Q9NPG1 666 aa20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.01■□□□□ 0.79
SHKBP1-222ENST00000600320 MEI4A8MW99 385 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 LDB2O43679 373 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 SLU7O95391 586 aaKnown RBP20■□□□□ 0.79
SHKBP1-222ENST00000600320 RHOXF2BP0C7M4 288 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 ETV3P41162 512 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 MAGEA3P43357 314 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 DRG2P55039 364 aaKnown RBP20■□□□□ 0.79
SHKBP1-222ENST00000600320 CRADDP78560 199 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 SARNPP82979 210 aaKnown RBP20■□□□□ 0.79
SHKBP1-222ENST00000600320 CREB5Q02930 508 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 SEPT6Q14141 434 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 TAF1AQ15573 450 aaPredicted RBP20■□□□□ 0.79
SHKBP1-222ENST00000600320 LPAL2Q16609 132 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 CCDC38Q502W7 563 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 FNBP1LQ5T0N5 605 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 KDM7AQ6ZMT4 941 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 PRR23BQ6ZRT6 265 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 MICALCLQ6ZW33 695 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 MPP5Q8N3R9 675 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 BBOF1Q8ND07 529 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 KLF6Q99612 283 aaPredicted RBP20■□□□□ 0.79
SHKBP1-222ENST00000600320 MYOCQ99972 504 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 RHOXF2Q9BQY4 288 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 EPB41L5Q9HCM4 733 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 XAB2Q9HCS7 855 aaKnown RBP20■□□□□ 0.79
SHKBP1-222ENST00000600320 BPIFA1Q9NP55 256 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 SYBUQ9NX95 663 aa20■□□□□ 0.79
SHKBP1-222ENST00000600320 A0A1W2PPC4 97 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 CCDC78A2IDD5 438 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 WNT9AO14904 365 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 MLNP12872 115 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 NPY2RP49146 381 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 SPINT3P49223 89 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 DHPSP49366 369 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 PELI3Q8N2H9 469 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 TP53I13Q8NBR0 393 aaPredicted RBP19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 ASB12Q8WXK4 309 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 FOXJ1Q92949 421 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 DTD2Q96FN9 168 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 KCNH6Q9H252 994 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 FAM86C1Q9NVL1 165 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 IL17CQ9P0M4 197 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 EIF2B4Q9UI10 523 aaKnown RBP19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 CD84Q9UIB8 345 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 CA5BQ9Y2D0 317 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 SCN8AQ9UQD0 1980 aa19.99■□□□□ 0.79
SHKBP1-222ENST00000600320 TNRC6BQ9UPQ9 1833 aaKnown RBP19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 BANF1O75531 89 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 RHOBTB1O94844 696 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 BPIP17213 487 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 HOXD11P31277 338 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 HMGCLP35914 325 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 ZNF140P52738 457 aaPredicted RBP19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 PTPN5P54829 565 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 CALCOCO2Q13137 446 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 SGCGQ13326 291 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 AGERQ15109 404 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 ELF2Q15723 593 aa19.98■□□□□ 0.79
SHKBP1-222ENST00000600320 WSCD2Q2TBF2 565 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms