RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 BFARQ9NZS9 450 aa12.66□□□□□ -0.38
CHMP2A-206ENST00000600118 PCDHGA2Q9Y5H1 932 aa12.66□□□□□ -0.38
CHMP2A-206ENST00000600118 IGLON5A6NGN9 336 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 MROH6A6NGR9 719 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 METTL12A8MUP2 240 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 E7ESA3 106 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 RPP40O75818 363 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 PCDH8O95206 1070 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 ELFN1P0C7U0 828 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 ADRA1DP25100 572 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 MGAT1P26572 445 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 HMGCLP35914 325 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 ZNF140P52738 457 aaPredicted RBP12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 PLTPP55058 493 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 SRSF5Q13243 272 aaKnown RBP12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 MTM1Q13496 603 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 ARHGEF7Q14155 803 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 FGL2Q14314 439 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 POU6F1Q14863 301 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 MSS51Q4VC12 460 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 PCID2Q5JVF3 399 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 RFLNAQ6ZTI6 216 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 GLT6D1Q7Z4J2 308 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 C11orf74Q86VG3 221 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 IFT20Q8IY31 132 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 ORAI3Q9BRQ5 295 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 GPR63Q9BZJ6 419 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 PHACTR1Q9C0D0 580 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 DUSP15Q9H1R2 295 aaPredicted RBP12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 EPC1Q9H2F5 836 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 SYBUQ9NX95 663 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 IL17CQ9P0M4 197 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 NFKBIL1Q9UBC1 381 aaPredicted RBP12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 RIMKLBQ9ULI2 386 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 TCAF1Q9Y4C2 921 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 ARL5AQ9Y689 179 aa12.65□□□□□ -0.38
CHMP2A-206ENST00000600118 ANKRD36A6QL64 1941 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 HEATR9A2RTY3 570 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 RGSL1A5PLK6 1076 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 PRR23AA6NEV1 266 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 FAM47DPA6NHR8 397 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 SDR42E2A6NKP2 422 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 NDUFS2O75306 463 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 TM7SF2O76062 418 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 RECQL5O94762 991 aaPredicted RBP12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 CRTAMO95727 393 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 LPOP22079 712 aaPredicted RBP12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 SPINT3P49223 89 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 CARSP49589 748 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 ARL4CP56559 192 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 CRADDP78560 199 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 RPL6Q02878 288 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 ACVR1Q04771 509 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 CUL1Q13616 776 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 HIF1AQ16665 826 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 DNAJC21Q5F1R6 531 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 SPDYCQ5MJ68 293 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 Q6ZVL8 140 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 CYP2U1Q7Z449 544 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 SLC41A1Q8IVJ1 513 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 PDIK1LQ8N165 341 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 MPP5Q8N3R9 675 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 EIF1ADQ8N9N8 165 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 PTCD2Q8WV60 388 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 RUBCNQ92622 972 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 PEX13Q92968 403 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 BIRC7Q96CA5 298 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 DTD2Q96FN9 168 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 WDR83Q9BRX9 315 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 KIFC1Q9BW19 673 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 SLC17A9Q9BYT1 436 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 FOXP3Q9BZS1 431 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 EBF2Q9HAK2 575 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 MRM3Q9HC36 420 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 KCTD3Q9Y597 815 aa12.64□□□□□ -0.39
CHMP2A-206ENST00000600118 PLXND1Q9Y4D7 1925 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 MAGEB16A2A368 324 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 C2orf81A6NN90 581 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 WNT9AO14904 365 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 EIF3HO15372 352 aaKnown RBP eCLIP12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 LZTS3O60299 673 aaPredicted RBP12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 BPIP17213 487 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 TNFRSF8P28908 595 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 MAT2AP31153 395 aaKnown RBP12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 NUDT1P36639 197 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 ETV3P41162 512 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 PDE1BQ01064 536 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 DHX9Q08211 1270 aaKnown RBP12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 TCF15Q12870 199 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 LAMB3Q13751 1172 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 PTPRCAPQ14761 206 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 ACOX1Q15067 660 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 PLK5Q496M5 336 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 CCDC38Q502W7 563 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 TSTD2Q5T7W7 516 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 PMS2CLQ68D20 193 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 DENND2CQ68D51 928 aa12.63□□□□□ -0.39
CHMP2A-206ENST00000600118 ZNF765Q7L2R6 523 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms