RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 TIGD7Q6NT04 549 aaPredicted RBP12.16□□□□□ -0.46
LIG1-217ENST00000599165 PNCKQ6P2M8 343 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 CRTC1Q6UUV9 634 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 ENPP7Q6UWV6 458 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 RAD9BQ6WBX8 426 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 Q6ZVL8 140 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 TMEM139Q8IV31 216 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 CACTIN-AS1Q8N1I8 211 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 BBS5Q8N3I7 341 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.16□□□□□ -0.46
LIG1-217ENST00000599165 NSMCE1Q8WV22 266 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 BTN2A2Q8WVV5 523 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 WDR92Q96MX6 357 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 HERPUD2Q9BSE4 406 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 DUSP23Q9BVJ7 150 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 CEP41Q9BYV8 373 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 SAE1Q9UBE0 346 aaPredicted RBP12.16□□□□□ -0.46
LIG1-217ENST00000599165 AMACRQ9UHK6 382 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 ALG6Q9Y672 507 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 DGKBQ9Y6T7 804 aa12.16□□□□□ -0.46
LIG1-217ENST00000599165 UNC13CQ8NB66 2214 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 ADAMTS20P59510 1910 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 A0A1W2PNU3 283 aaPredicted RBP12.15□□□□□ -0.46
LIG1-217ENST00000599165 EME2A4GXA9 379 aaPredicted RBP12.15□□□□□ -0.46
LIG1-217ENST00000599165 APOL1O14791 398 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 OPA1O60313 960 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 JCHAINP01591 159 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 HOXC4P09017 264 aaPredicted RBP12.15□□□□□ -0.46
LIG1-217ENST00000599165 ALPPL2P10696 532 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 CDK4P11802 303 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 KRT10P13645 584 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 MX2P20592 715 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 PTSQ03393 145 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 CYP4F3Q08477 520 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 LLGL1Q15334 1064 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 FAXCQ5TGI0 409 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 LRRC66Q68CR7 880 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 HID1Q8IV36 788 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 RHOT1Q8IXI2 618 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 CCDC170Q8IYT3 715 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 CCL4L1Q8NHW4 92 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 TPCN2Q8NHX9 752 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 KRT35Q92764 455 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 TADA1Q96BN2 335 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 NUS1Q96E22 293 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 PANX2Q96RD6 677 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 TRIB3Q96RU7 358 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 WDR24Q96S15 920 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 RBM15Q96T37 977 aaKnown RBP eCLIP12.15□□□□□ -0.46
LIG1-217ENST00000599165 AGAP2Q99490 1192 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 TEX101Q9BY14 249 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 BRD8Q9H0E9 1235 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 CCDC86Q9H6F5 360 aaKnown RBP12.15□□□□□ -0.46
LIG1-217ENST00000599165 KLQ9UEF7 1012 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 CHKBQ9Y259 395 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 PCDHB1Q9Y5F3 818 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 HEY1Q9Y5J3 304 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 ST14Q9Y5Y6 855 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 DUSP10Q9Y6W6 482 aa12.15□□□□□ -0.46
LIG1-217ENST00000599165 PTPRQQ9UMZ3 2332 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 A0A0A6YYK5 440 aaPredicted RBP12.14□□□□□ -0.47
LIG1-217ENST00000599165 A0A0U1RQJ8 604 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 CAPN8A6NHC0 703 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 PSMD11O00231 422 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 PSTPIP1O43586 416 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 RASGRP1O95267 797 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 NDUFA10O95299 355 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 MT-CO3P00414 261 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 GP1BAP07359 652 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 TNNT1P13805 278 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 JUPP14923 745 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 TGM2P21980 687 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 STC1P52823 247 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 PDX1P52945 283 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 DYNLT1P63172 113 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 ITKQ08881 620 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 PRKD1Q15139 912 aaPredicted RBP12.14□□□□□ -0.47
LIG1-217ENST00000599165 QPCTQ16769 361 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 ZFYVE27Q5T4F4 411 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 DENND2CQ68D51 928 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 SPOCD1Q6ZMY3 1216 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 EFL1Q7Z2Z2 1120 aaKnown RBP12.14□□□□□ -0.47
LIG1-217ENST00000599165 RD3Q7Z3Z2 195 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 HEATR4Q86WZ0 1026 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 PDCD7Q8N8D1 485 aaKnown RBP12.14□□□□□ -0.47
LIG1-217ENST00000599165 KYQ8NBH2 561 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 CCNYQ8ND76 341 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 OR56A4Q8NGH8 313 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 IFI44Q8TCB0 444 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 SCAMP4Q969E2 229 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 EID2BQ96D98 161 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 LYSMD1Q96S90 227 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 FRMD8Q9BZ67 464 aaPredicted RBP12.14□□□□□ -0.47
LIG1-217ENST00000599165 SLC13A1Q9BZW2 595 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 LACRTQ9GZZ8 138 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 ABCG8Q9H221 673 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 WDR26Q9H7D7 661 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 USP29Q9HBJ7 922 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 CD84Q9UIB8 345 aa12.14□□□□□ -0.47
LIG1-217ENST00000599165 RABGEF1Q9UJ41 708 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms