RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 TFDP2Q14188 446 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 IHHQ14623 411 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 ZNF423Q2M1K9 1284 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 TMEM52BQ4KMG9 183 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 ZNF542PQ5EBM4 170 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 TFDP3Q5H9I0 405 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 DENND2CQ68D51 928 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 Q6ZSR6 202 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 ZC3H18Q86VM9 953 aaKnown RBP12.13□□□□□ -0.47
ZNF548-209ENST00000598895 VSIG1Q86XK7 387 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 NAXDQ8IW45 347 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 KLHL7Q8IXQ5 586 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 TMEM145Q8NBT3 493 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 EXD1Q8NHP7 514 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 HCAR2Q8TDS4 363 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 ECHDC3Q96DC8 303 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 RBM41Q96IZ5 413 aaKnown RBP12.13□□□□□ -0.47
ZNF548-209ENST00000598895 BMFQ96LC9 184 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 OLFM3Q96PB7 478 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 SMIM14Q96QK8 99 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 ELF4Q99607 663 aaPredicted RBP12.13□□□□□ -0.47
ZNF548-209ENST00000598895 KLF6Q99612 283 aaPredicted RBP12.13□□□□□ -0.47
ZNF548-209ENST00000598895 HERPUD2Q9BSE4 406 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 MBNL1Q9NR56 388 aaKnown RBP12.13□□□□□ -0.47
ZNF548-209ENST00000598895 PLAAQ9Y263 795 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 PCDHA3Q9Y5H8 950 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 RAI2Q9Y5P3 530 aa12.13□□□□□ -0.47
ZNF548-209ENST00000598895 GOLGA6L10A0A0M3HER8 536 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 A0A0U1RQS6 177 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 A0A1B0GTQ1 180 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 SPAARA0A1B0GVQ0 90 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 F5H423 210 aaPredicted RBP12.12□□□□□ -0.47
ZNF548-209ENST00000598895 PPP1R12AO14974 1030 aaPredicted RBP12.12□□□□□ -0.47
ZNF548-209ENST00000598895 LZTS3O60299 673 aaPredicted RBP12.12□□□□□ -0.47
ZNF548-209ENST00000598895 PDHA1P08559 390 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 ALPIP09923 528 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 FAM153BP0C7A2 387 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 CTNNA2P26232 953 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 IGFALSP35858 605 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 MMP12P39900 470 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 POLR2LP62875 67 aaKnown RBP12.12□□□□□ -0.47
ZNF548-209ENST00000598895 NIPAL4Q0D2K0 466 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 RALGDSQ12967 914 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 BNIP3Q12983 259 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 ZNF211Q13398 564 aaPredicted RBP12.12□□□□□ -0.47
ZNF548-209ENST00000598895 PDK1Q15118 436 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 SHBQ15464 509 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 TAZQ16635 292 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 FAM153CQ494X1 144 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 CEP85LQ5SZL2 805 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 NT5DC3Q86UY8 548 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 SLC22A18ASQ8N1D0 253 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 OTUD6BQ8N6M0 293 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 CNTD1Q8N815 330 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 ALG3Q92685 438 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 P3H4Q92791 437 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 AGAP3Q96P47 875 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 FAM118BQ9BPY3 351 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 SLC32A1Q9H598 525 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 C10orf88Q9H8K7 445 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 B4GALT6Q9UBX8 382 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 FAM153AQ9UHL3 310 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 BTBD3Q9Y2F9 522 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 UTP11Q9Y3A2 253 aaKnown RBP12.12□□□□□ -0.47
ZNF548-209ENST00000598895 LAMA1P25391 3075 aa12.12□□□□□ -0.47
ZNF548-209ENST00000598895 FAM187AA6NFU0 413 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 HTRA2O43464 458 aaPredicted RBP12.11□□□□□ -0.47
ZNF548-209ENST00000598895 MAGEC1O60732 1142 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 SOCS5O75159 536 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 PGLSO95336 258 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 KRT14P02533 472 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 PCCBP05166 539 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 ELFN1P0C7U0 828 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 PYGMP11217 842 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 CSRP1P21291 193 aaKnown RBP12.11□□□□□ -0.47
ZNF548-209ENST00000598895 TGM2P21980 687 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 CD86P42081 329 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 PEX5P50542 639 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 SUOXP51687 545 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 RWDD2BP57060 319 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 IFI35P80217 286 aaPredicted RBP12.11□□□□□ -0.47
ZNF548-209ENST00000598895 SLC14A1Q13336 389 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 PDE1CQ14123 709 aaPredicted RBP12.11□□□□□ -0.47
ZNF548-209ENST00000598895 ACOX1Q15067 660 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 IRF4Q15306 451 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 TPRG1LQ5T0D9 272 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 ARMC12Q5T9G4 340 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 N4BP2L1Q5TBK1 243 aaPredicted RBP12.11□□□□□ -0.47
ZNF548-209ENST00000598895 ICE2Q659A1 982 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 DPPA4Q7L190 304 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 ERMP1Q7Z2K6 904 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 KDELC2Q7Z4H8 507 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 ABI3BPQ7Z7G0 1075 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 PIP4P1Q86T03 277 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 IQCHQ86VS3 1027 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 HOOK3Q86VS8 718 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 TP53I13Q8NBR0 393 aaPredicted RBP12.11□□□□□ -0.47
ZNF548-209ENST00000598895 ARRDC2Q8TBH0 407 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 RHBDD1Q8TEB9 315 aa12.11□□□□□ -0.47
ZNF548-209ENST00000598895 ZBTB9Q96C00 473 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms