RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ANKRD66B4E2M5 251 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 H3BM21 787 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 PIAS2O75928 621 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 CSF2P04141 144 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 RBP3P10745 1247 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 NME1P15531 152 aaKnown RBP13.86□□□□□ -0.19
UPF1-205ENST00000598209 ZNF30P17039 623 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 JUNDP17535 347 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 NFKB1P19838 968 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 DGKAP23743 735 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 ETV3P41162 512 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 HNRNPKP61978 463 aaKnown RBP eCLIP13.86□□□□□ -0.19
UPF1-205ENST00000598209 GALNT3Q14435 633 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 PCSK7Q16549 785 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 ESRP1Q6NXG1 681 aaKnown RBP13.86□□□□□ -0.19
UPF1-205ENST00000598209 DARS2Q6PI48 645 aaKnown RBP13.86□□□□□ -0.19
UPF1-205ENST00000598209 Q6ZVL8 140 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 PID1Q7Z2X4 250 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 KDELC2Q7Z4H8 507 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 CDKL3Q8IVW4 592 aaPredicted RBP13.86□□□□□ -0.19
UPF1-205ENST00000598209 EID2Q8N6I1 236 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 UBE2Q2Q8WVN8 375 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 DTD2Q96FN9 168 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 ALS2CR12Q96Q35 445 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 TRIB3Q96RU7 358 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 FERMT1Q9BQL6 677 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 MLPHQ9BV36 600 aaPredicted RBP13.86□□□□□ -0.19
UPF1-205ENST00000598209 ADGRE3Q9BY15 652 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 UCKL1Q9NWZ5 548 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 UBP1Q9NZI7 540 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 FTSJ1Q9UET6 329 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 KLF15Q9UIH9 416 aa13.86□□□□□ -0.19
UPF1-205ENST00000598209 F5H423 210 aaPredicted RBP13.85□□□□□ -0.19
UPF1-205ENST00000598209 PMPCBO75439 489 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 CLDN7O95471 211 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 C1SP09871 688 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 HTR1BP28222 390 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 STC1P52823 247 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 PTSQ03393 145 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 CDK18Q07002 472 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 KLF1Q13351 362 aaPredicted RBP13.85□□□□□ -0.19
UPF1-205ENST00000598209 NFATC4Q14934 902 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 SEL1L2Q5TEA6 688 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 MEI1Q5TIA1 1274 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 PNCKQ6P2M8 343 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 RFLNAQ6ZTI6 216 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 TECPR1Q7Z6L1 1165 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 PHACTR4Q8IZ21 702 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 PELI3Q8N2H9 469 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 SLC25A45Q8N413 288 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 TTC13Q8NBP0 860 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 ANP32BQ92688 251 aaKnown RBP13.85□□□□□ -0.19
UPF1-205ENST00000598209 FCRL5Q96RD9 977 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 LYSMD1Q96S90 227 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 FAM153AQ9UHL3 310 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 RSPH14Q9UHP6 348 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 TRHDEQ9UKU6 1024 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 PNMA8BQ9ULN7 279 aaPredicted RBP13.85□□□□□ -0.19
UPF1-205ENST00000598209 SCN8AQ9UQD0 1980 aa13.85□□□□□ -0.19
UPF1-205ENST00000598209 GOLGA4Q13439 2230 aaKnown RBP13.84□□□□□ -0.19
UPF1-205ENST00000598209 PTPRBP23467 1997 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 C1orf232A0A0U1RR37 186 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 TCRBV7S2A1N4TA0A589 114 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 GOLGA6CA6NDK9 693 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 GOLGA6BA6NDN3 693 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 K7ESM1 405 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 CACNB4O00305 520 aaPredicted RBP13.84□□□□□ -0.19
UPF1-205ENST00000598209 FFAR2O15552 330 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 KCNN4O15554 427 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 TNFSF14O43557 240 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 LDOC1O95751 146 aaPredicted RBP13.84□□□□□ -0.19
UPF1-205ENST00000598209 NDST3O95803 873 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 FTH1P19P0C7X4 201 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 GOLGA6DP0CG33 693 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 TSHRP16473 764 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 PMLP29590 882 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 TRIM23P36406 574 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 KIAA1024LP59773 190 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 PPARDQ03181 441 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 FOXC1Q12948 553 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 RPS6KA1Q15418 735 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 CDKN3Q16667 212 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 FAXCQ5TGI0 409 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 KDELC1Q6UW63 502 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 ENPP7Q6UWV6 458 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 RBFAQ8N0V3 343 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 ZNF548Q8NEK5 533 aaPredicted RBP13.84□□□□□ -0.19
UPF1-205ENST00000598209 ATL2Q8NHH9 583 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 BTN2A2Q8WVV5 523 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 FUBP1Q96AE4 644 aaKnown RBP13.84□□□□□ -0.19
UPF1-205ENST00000598209 OXNAD1Q96HP4 312 aaPredicted RBP13.84□□□□□ -0.19
UPF1-205ENST00000598209 CNDP2Q96KP4 475 aaKnown RBP13.84□□□□□ -0.19
UPF1-205ENST00000598209 WDR92Q96MX6 357 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 TCEAL2Q9H3H9 227 aaPredicted RBP13.84□□□□□ -0.19
UPF1-205ENST00000598209 WDR26Q9H7D7 661 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 GOLGA6AQ9NYA3 693 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 APOBEC3BQ9UH17 382 aaKnown RBP13.84□□□□□ -0.19
UPF1-205ENST00000598209 CD84Q9UIB8 345 aa13.84□□□□□ -0.19
UPF1-205ENST00000598209 APOBEC2Q9Y235 224 aaKnown RBP13.84□□□□□ -0.19
UPF1-205ENST00000598209 NEMP2A6NFY4 417 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms