RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 CPP00450 1065 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 FTLP02792 175 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 CCDC172P0C7W6 258 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 MYCLP1P12525 358 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 SKILP12757 684 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 GLB1P16278 677 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 CR2P20023 1033 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 TRIM23P36406 574 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 ETV3P41162 512 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 MAPK10P53779 464 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 AP1S1P61966 158 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 EIF3IQ13347 325 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 ZNF235Q14590 738 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 RFTN1Q14699 578 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 C16orf72Q14CZ0 275 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 SKOR2Q2VWA4 1001 aaPredicted RBP12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 MAP9Q49MG5 647 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 ANO6Q4KMQ2 910 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 CCDC183Q5T5S1 534 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 OGFOD3Q6PK18 319 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 RFLNAQ6ZTI6 216 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 HSD11B1LQ7Z5J1 315 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 TSPAN33Q86UF1 283 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 HEATR4Q86WZ0 1026 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 NRROSQ86YC3 692 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 SLITRK4Q8IW52 837 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 HSPH1Q92598 858 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 PMEPA1Q969W9 287 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 WBP1Q96G27 269 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 BTBD6Q96KE9 485 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 TMEM74Q96NL1 305 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 EIF3CQ99613 913 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 ZWILCHQ9H900 591 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 CARS2Q9HA77 564 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 DONSONQ9NYP3 566 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 TMEM63CQ9P1W3 806 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 SEPT3Q9UH03 358 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 APPL1Q9UKG1 709 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 PCDHGA7Q9Y5G6 932 aa12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 ASH1LQ9NR48 2969 aaKnown RBP12.11□□□□□ -0.47
SOX2-OT-228ENST00000597828 GOLGA6CA6NDK9 693 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 GOLGA6BA6NDN3 693 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 NPIPB15A6NHN6 443 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 J3QKU1 62 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 HTRA2O43464 458 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 B4GAT1O43505 415 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 HEXIM1O94992 359 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 GOLGA6DP0CG33 693 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 CTPS1P17812 591 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 WT1P19544 449 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 KELP23276 732 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 VIPR1P32241 457 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 GNPDA1P46926 289 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 POLD2P49005 469 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 OR1D5P58170 312 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 B4GALNT1Q00973 533 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 ZFP36L1Q07352 338 aaKnown RBP12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 NSUN2Q08J23 767 aaKnown RBP eCLIP12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 DPYSL2Q16555 572 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 PHF19Q5T6S3 580 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 DOK6Q6PKX4 331 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 ZFAND4Q86XD8 727 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 EXD3Q8N9H8 876 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 RCBTB1Q8NDN9 531 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 OR6C4Q8NGE1 309 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 FNIP1Q8TF40 1166 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 USP7Q93009 1102 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 DTD2Q96FN9 168 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 MED8Q96G25 268 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 NUDCD1Q96RS6 583 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 FRMD8Q9BZ67 464 aaPredicted RBP12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 NOD2Q9HC29 1040 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 GOLGA6AQ9NYA3 693 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 CD84Q9UIB8 345 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 MYO6Q9UM54 1294 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 PLEKHM1Q9Y4G2 1056 aa12.1□□□□□ -0.47
SOX2-OT-228ENST00000597828 TNRC6AQ8NDV7 1962 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 B8ZZF3 427 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 C9orf172C9J069 976 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 H3BRJ5 948 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 TNFRSF10CO14798 259 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 MAFKO60675 156 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 SOCS5O75159 536 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 CEACAM5P06731 702 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 HOXC4P09017 264 aaPredicted RBP12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 LIPCP11150 499 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 CCNB1P14635 433 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 PRKCIP41743 596 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 RENBPP51606 427 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 POLR2LP62875 67 aaKnown RBP12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 CDK3Q00526 305 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 ARHGEF7Q14155 803 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 LINC00303Q3SY05 128 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 AMZ1Q400G9 498 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 RAET1GQ6H3X3 334 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 PPP1R2P3Q6NXS1 205 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 SLC30A9Q6PML9 568 aa12.09□□□□□ -0.47
SOX2-OT-228ENST00000597828 TMCO3Q6UWJ1 677 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms