RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 FEM1CQ96JP0 617 aa17.41■□□□□ 0.38
ARHGEF1-213ENST00000595897 GPATCH1Q9BRR8 931 aaKnown RBP17.41■□□□□ 0.38
ARHGEF1-213ENST00000595897 MRM3Q9HC36 420 aaKnown RBP17.41■□□□□ 0.38
ARHGEF1-213ENST00000595897 MID1IP1Q9NPA3 183 aa17.41■□□□□ 0.38
ARHGEF1-213ENST00000595897 ACTR3BQ9P1U1 418 aa17.41■□□□□ 0.38
ARHGEF1-213ENST00000595897 DNAJC15Q9Y5T4 150 aa17.41■□□□□ 0.38
ARHGEF1-213ENST00000595897 ARPC2O15144 300 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 MATN3O15232 486 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 SLC4A1P02730 911 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 MTHFD1P11586 935 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 EEF1B2P24534 225 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 ADRA1AP35348 466 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 MAGEA8P43361 318 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 YAP1P46937 504 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 CCT8P50990 548 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 MAPK10P53779 464 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 PLCL1Q15111 1095 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 ZNF829Q3KNS6 432 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 AARS2Q5JTZ9 985 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 KCTD8Q6ZWB6 473 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 ZNF420Q8TAQ5 688 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 VPS50Q96JG6 964 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 RPL10LQ96L21 214 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 MRGPRX2Q96LB1 330 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 UBXN10Q96LJ8 280 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 CMTM6Q9NX76 183 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 PKD2L2Q9NZM6 624 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 CDH7Q9ULB5 785 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 CCL22O00626 93 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 MAFKO60675 156 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 SH3BP2P78314 561 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 ITKQ08881 620 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 BNIP3Q12983 259 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 RANBP10Q6VN20 620 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 DNAJB14Q8TBM8 379 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 MYRFLQ96LU7 910 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 ZFP42Q96MM3 310 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 IL12RB2Q99665 862 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 SLC39A8Q9C0K1 460 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 NAA50Q9GZZ1 169 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 SOX17Q9H6I2 414 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 VTA1Q9NP79 307 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 CD320Q9NPF0 282 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 SMPD3Q9NY59 655 aaPredicted RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 ABCD2Q9UBJ2 740 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 PPP6CO00743 305 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 PIP5K1BO14986 540 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 RASAL1O95294 804 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 MT-ND1P03886 318 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 HSD17B1P14061 328 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 SLC6A2P23975 617 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 LEPRP48357 1165 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 WNT3AP56704 352 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 ATP6AP1Q15904 470 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 LCN8Q6JVE9 175 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 PIM3Q86V86 326 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 ARHGAP12Q8IWW6 846 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 ANKRD13AQ8IZ07 590 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 ADGRG5Q8IZF4 528 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 MINDY1Q8N5J2 469 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 ARRDC4Q8NCT1 418 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 TRPV3Q8NET8 790 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.4■□□□□ 0.386e-10■■■■■ 34.4
ARHGEF1-213ENST00000595897 LRRC58Q96CX6 371 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 SENP8Q96LD8 212 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 PAIP2BQ9ULR5 123 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 DOLKQ9UPQ8 538 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 CRYL1Q9Y2S2 319 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 V9GYQ6 96 aa17.4■□□□□ 0.38
ARHGEF1-213ENST00000595897 GABRDO14764 452 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 SNAP91O60641 907 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 FCGR1AP12314 374 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 UGT1A1P22309 533 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 UGT1A4P22310 534 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 UGT1A3P35503 534 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 UGT1A5P35504 534 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 CAPGP40121 348 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 CASP2P42575 452 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 IREB2P48200 963 aaKnown RBP17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 CCR3P51677 355 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 CDC42EP1Q00587 391 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 GRB7Q14451 532 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 FUT11Q495W5 492 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 UNC50Q53HI1 259 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 CCDC117Q8IWD4 279 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 KLHDC8BQ8IXV7 354 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 ZBTB8BQ8NAP8 495 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 TWIST2Q8WVJ9 160 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 TMEM40Q8WWA1 233 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 COX4I2Q96KJ9 171 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 IPPQ9Y573 584 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 WDR90Q96KV7 1748 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 SIX3O95343 332 aaPredicted RBP17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 HGFP14210 728 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 VARSP26640 1264 aaKnown RBP17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 MAP4P27816 1152 aaKnown RBP17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 CDKN2DP55273 166 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 HERVK_113P63132 956 aa17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 YBX1P67809 324 aaKnown RBP17.39■□□□□ 0.37
ARHGEF1-213ENST00000595897 ISCA2Q86U28 154 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms