RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 BBS5Q8N3I7 341 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 NIPA2Q8N8Q9 360 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 GPR156Q8NFN8 814 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 WDR48Q8TAF3 677 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 PTCD2Q8WV60 388 aaKnown RBP17.05■□□□□ 0.32
CCDC9-202ENST00000595659 LRRN3Q9H3W5 708 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 DPEP2Q9H4A9 486 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 IFNKQ9P0W0 207 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 ATXN7L1Q9ULK2 861 aaPredicted RBP17.05■□□□□ 0.32
CCDC9-202ENST00000595659 CAPN11Q9UMQ6 739 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 PCDHGA8Q9Y5G5 932 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 BPTFQ12830 3046 aa17.05■□□□□ 0.32
CCDC9-202ENST00000595659 CCDC187A0A096LP49 1063 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 MYO1FO00160 1098 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 TNFRSF10CO14798 259 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 NOBOXO60393 691 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 SOCS5O75159 536 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 PGLSO95336 258 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 FUCA1P04066 466 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 HOXC4P09017 264 aaPredicted RBP17.04■□□□□ 0.32
CCDC9-202ENST00000595659 HGFP14210 728 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 KELP23276 732 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 SERPINB6P35237 376 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 POLD2P49005 469 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 Q6ZVL8 140 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 HEATR4Q86WZ0 1026 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 CCNJLQ8IV13 435 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 ARL14Q8N4G2 192 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 SEMA3CQ99985 751 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 CARS2Q9HA77 564 aaKnown RBP17.04■□□□□ 0.32
CCDC9-202ENST00000595659 CD84Q9UIB8 345 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 PHTF1Q9UMS5 762 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 LUC7L2Q9Y383 392 aaKnown RBP17.04■□□□□ 0.32
CCDC9-202ENST00000595659 RNF215Q9Y6U7 377 aa17.04■□□□□ 0.32
CCDC9-202ENST00000595659 SMG1Q96Q15 3661 aaKnown RBP17.04■□□□□ 0.32
CCDC9-202ENST00000595659 TEX51A0A1B0GUA7 166 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 PRSS38A1L453 326 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 CDRT15L2A8MXV6 281 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 D6RAR5 112 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 GOLGA6L19H0YKK7 550 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 ATXN7O15265 892 aaPredicted RBP17.03■□□□□ 0.32
CCDC9-202ENST00000595659 MFSD11O43934 449 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 GYPCP04921 128 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 PDHA1P08559 390 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 CYP2A6P11509 494 aaPredicted RBP17.03■□□□□ 0.32
CCDC9-202ENST00000595659 MYCLP1P12525 358 aaPredicted RBP17.03■□□□□ 0.32
CCDC9-202ENST00000595659 GNPDA1P46926 289 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 INHBCP55103 352 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 TMPRSS3P57727 454 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 CERCAMQ5T4B2 595 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 ARMC12Q5T9G4 340 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 SPECC1LQ69YQ0 1117 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 OGFOD3Q6PK18 319 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 RAB11FIP2Q7L804 512 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 FBXO39Q8N4B4 442 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 DTD2Q96FN9 168 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 PHPT1Q9NRX4 125 aaPredicted RBP17.03■□□□□ 0.32
CCDC9-202ENST00000595659 SPATS2LQ9NUQ6 558 aaKnown RBP17.03■□□□□ 0.32
CCDC9-202ENST00000595659 LRIT1Q9P2V4 623 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 TTLL3Q9Y4R7 772 aa17.03■□□□□ 0.32
CCDC9-202ENST00000595659 ASXL3Q9C0F0 2248 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 A0A1W2PQ67 120 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 PDE2AO00408 941 aaPredicted RBP17.02■□□□□ 0.32
CCDC9-202ENST00000595659 C1QL1O75973 258 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 CEACAM5P06731 702 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 GLB1P16278 677 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 AK4P27144 223 aaPredicted RBP17.02■□□□□ 0.32
CCDC9-202ENST00000595659 CASP14P31944 242 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 ARSEP51690 589 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 MAZP56270 477 aaKnown RBP17.02■□□□□ 0.32
CCDC9-202ENST00000595659 TAS2R40P59535 323 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 DSC2Q02487 901 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 ARHGEF7Q14155 803 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 DPYSL3Q14195 570 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 IHHQ14623 411 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 HADHQ16836 314 aaKnown RBP17.02■□□□□ 0.32
CCDC9-202ENST00000595659 C14orf28Q4W4Y0 310 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 FAM182AQ5T1J6 154 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 RAET1GQ6H3X3 334 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 DOK6Q6PKX4 331 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 IGF2-ASQ6U949 168 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 PCSK4Q6UW60 755 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 JAMLQ86YT9 394 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 CBARPQ8N350 705 aaPredicted RBP17.02■□□□□ 0.32
CCDC9-202ENST00000595659 TEX26Q8N6G2 289 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 KCTD6Q8NC69 237 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 OR6C4Q8NGE1 309 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 ZNF564Q8TBZ8 553 aaPredicted RBP17.02■□□□□ 0.32
CCDC9-202ENST00000595659 PIH1D2Q8WWB5 315 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 SCRN2Q96FV2 425 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 PACSIN1Q9BY11 444 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 DPH1Q9BZG8 443 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 CTTNBP2NLQ9P2B4 639 aa17.02■□□□□ 0.32
CCDC9-202ENST00000595659 PLD2O14939 933 aa17.01■□□□□ 0.31
CCDC9-202ENST00000595659 CCNB1P14635 433 aa17.01■□□□□ 0.31
CCDC9-202ENST00000595659 UGT1A5P35504 534 aa17.01■□□□□ 0.31
CCDC9-202ENST00000595659 CDK3Q00526 305 aa17.01■□□□□ 0.31
CCDC9-202ENST00000595659 HLTFQ14527 1009 aaKnown RBP eCLIP17.01■□□□□ 0.31
CCDC9-202ENST00000595659 ANKRD20A8PQ5CZ79 823 aa17.01■□□□□ 0.31
CCDC9-202ENST00000595659 LRRC66Q68CR7 880 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms