RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 HOXC4P09017 264 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 ALPPL2P10696 532 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 CDK4P11802 303 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 CKMT1AP12532 417 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 PECAM1P16284 738 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 ETV3P41162 512 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 VAV2P52735 878 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 HK3P52790 923 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 CLDN6P56747 220 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 SKOR1P84550 965 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 ILKQ13418 452 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 TFDP2Q14188 446 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 HS1BP3Q53T59 392 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 KAZNQ674X7 775 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 DENND2CQ68D51 928 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 RFLNAQ6ZTI6 216 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 Q6ZVL8 140 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 TECPR1Q7Z6L1 1165 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 GALNT15Q8N3T1 639 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 KDF1Q8NAX2 398 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 EXD1Q8NHP7 514 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 NUS1Q96E22 293 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 DTD2Q96FN9 168 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 LGR4Q9BXB1 951 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 SLC13A1Q9BZW2 595 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 ASXL3Q9C0F0 2248 aa18.5■□□□□ 0.55
SHKBP1-202ENST00000593764 FAM149AA5PLN7 773 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 TMEM202A6NGA9 273 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 LMO7DNF2Z398 122 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 CELA2BP08218 269 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 TSHRP16473 764 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 HTR1BP28222 390 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 CD86P42081 329 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 KIAA1024LP59773 190 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 SRP54P61011 504 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 RPL26P61254 145 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 PTSQ03393 145 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 PRKD1Q15139 912 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 DEFB133Q30KQ1 61 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 LRRC66Q68CR7 880 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 TMPRSS12Q86WS5 348 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 HID1Q8IV36 788 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 LRRC57Q8N9N7 239 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 TADA1Q96BN2 335 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 CALR3Q96L12 384 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 WDR92Q96MX6 357 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 AGAP3Q96P47 875 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 PCDH9Q9HC56 1237 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 KCTD5Q9NXV2 234 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 RPL26L1Q9UNX3 145 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 PCDHA3Q9Y5H8 950 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 CACNA1BQ00975 2339 aa18.49■□□□□ 0.55
SHKBP1-202ENST00000593764 KMT2BQ9UMN6 2715 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 A0A0U1RQJ8 604 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 YY2O15391 372 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 TGM2P21980 687 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 CTNNA1P35221 906 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 BLKP51451 505 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 EPHB1P54762 984 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 DAB2P98082 770 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 CAMK2BQ13554 666 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 ARHGEF7Q14155 803 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 ST3GAL2Q16842 350 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 TEX44Q53QW1 395 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 ZCCHC8Q6NZY4 707 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 BZW1Q7L1Q6 419 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 RD3Q7Z3Z2 195 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 NDUFAF2Q8N183 169 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 OR1E3Q8WZA6 343 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 IMP4Q96G21 291 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 PDXPQ96GD0 296 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 RBM41Q96IZ5 413 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 LYSMD1Q96S90 227 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 FGF22Q9HCT0 170 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 SEPT10Q9P0V9 454 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 KLQ9UEF7 1012 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 DGKBQ9Y6T7 804 aa18.48■□□□□ 0.55
SHKBP1-202ENST00000593764 LRP4O75096 1905 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 GRID2IPA4D2P6 1211 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 CAPN8A6NHC0 703 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 CACNB4O00305 520 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 RASGRP1O95267 797 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 CA4P22748 312 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 PTPN3P26045 913 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 DPTQ07507 201 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 PPP2R5EQ16537 467 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 CDKN3Q16667 212 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 QPCTQ16769 361 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 NT5DC3Q86UY8 548 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 CCDC50Q8IVM0 306 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 LPCAT1Q8NF37 534 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 OR56A4Q8NGH8 313 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 KIAA1524Q8TCG1 905 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 TFB1MQ8WVM0 346 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 P3H4Q92791 437 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 TRIB3Q96RU7 358 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 RBM15Q96T37 977 aaKnown RBP eCLIP18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 HERPUD2Q9BSE4 406 aa18.47■□□□□ 0.55
SHKBP1-202ENST00000593764 BOCQ9BWV1 1114 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms