RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 NELFCDQ8IXH7 590 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 HACE1Q8IYU2 909 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 CCDC89Q8N998 374 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 LINC01356Q8N9X3 169 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 ENGASEQ8NFI3 743 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 ZNF483Q8TF39 744 aaPredicted RBP8.03□□□□□ -1.12
ATG4D-210ENST00000588972 ATRIPQ8WXE1 791 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 HVCN1Q96D96 273 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 ACCSQ96QU6 501 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 LMF1Q96S06 567 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 PNKPQ96T60 521 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 PAAF1Q9BRP4 392 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 MSTO1Q9BUK6 570 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 VPS16Q9H269 839 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 SEC61A2Q9H9S3 476 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 G6PC2Q9NQR9 355 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 FSCN3Q9NQT6 498 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 MARCH5Q9NX47 278 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 ZDHHC7Q9NXF8 308 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 CTTNBP2NLQ9P2B4 639 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 HSFX1Q9UBD0 423 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 DNAJB11Q9UBS4 358 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 VPS51Q9UID3 782 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 SMG5Q9UPR3 1016 aaKnown RBP8.03□□□□□ -1.12
ATG4D-210ENST00000588972 PRG3Q9Y2Y8 225 aaPredicted RBP8.03□□□□□ -1.12
ATG4D-210ENST00000588972 ZFP37Q9Y6Q3 630 aaPredicted RBP8.03□□□□□ -1.12
ATG4D-210ENST00000588972 BAHCC1Q9P281 2608 aa8.03□□□□□ -1.12
ATG4D-210ENST00000588972 MTCL1Q9Y4B5 1905 aaKnown RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 CNOT1A5YKK6 2376 aaKnown RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 PVALEFA0A1B0GWK0 134 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 KANSL1LA0AUZ9 987 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 CASTOR2A6NHX0 329 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 CD3EAPO15446 510 aaKnown RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 IPO13O94829 963 aaKnown RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 RPN1P04843 607 aaKnown RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 INHBBP09529 407 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 SPATA31D3P0C874 917 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 SCP2P22307 547 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 ADSSP30520 456 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 HOXD13P35453 343 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 OR1G1P47890 313 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 AFF3P51826 1226 aaKnown RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 PRKAG1P54619 331 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 SPAG1Q07617 926 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 DSC1Q08554 894 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 MESP2Q0VG99 397 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 GRIK3Q13003 919 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 STK4Q13043 487 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 ELAVL1Q15717 326 aaKnown RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 NAB2Q15742 525 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 MLF2Q15773 248 aaPredicted RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 ZNF385BQ569K4 471 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 DSTYKQ6XUX3 929 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 SPATA31D4Q6ZUB0 917 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 BBS12Q6ZW61 710 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 ANKS1BQ7Z6G8 1248 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 RNF168Q8IYW5 571 aaPredicted RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 SYCP3Q8IZU3 236 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 SPARTQ8N0X7 666 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 KIAA0895Q8NCT3 520 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 CEP70Q8NHQ1 597 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 NOC3LQ8WTT2 800 aaKnown RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 C3orf49Q96BT1 292 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 SAAL1Q96ER3 474 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 ZMAT2Q96NC0 199 aaKnown RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 LRRC37BQ96QE4 947 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 PTDSS2Q9BVG9 487 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 CCDC94Q9BW85 323 aaPredicted RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 REXO4Q9GZR2 422 aaKnown RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 GOLGA2P5Q9HBQ8 144 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 EXOC1Q9NV70 894 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 C19orf53Q9UNZ5 99 aaPredicted RBP8.02□□□□□ -1.13
ATG4D-210ENST00000588972 SH3BP1Q9Y3L3 701 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 COL4A3Q01955 1670 aa8.02□□□□□ -1.13
ATG4D-210ENST00000588972 SMIM28A0A1B0GU29 152 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 CCDC78A2IDD5 438 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 GOLGA8IPA6NC78 632 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 TCAF2A6NFQ2 919 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 GOLGA8JA6NMD2 632 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 OGTO15294 1046 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 TGFB1I1O43294 461 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 MFAP3LO75121 409 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 ADRB1P08588 477 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 HGFP14210 728 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 HK1P19367 917 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 ABCD1P33897 745 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 RPS19P39019 145 aaKnown RBP8.01□□□□□ -1.13
ATG4D-210ENST00000588972 ACOT2P49753 483 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 ATXN1P54253 815 aaKnown RBP8.01□□□□□ -1.13
ATG4D-210ENST00000588972 CSTF1Q05048 431 aaKnown RBP8.01□□□□□ -1.13
ATG4D-210ENST00000588972 FHL3Q13643 280 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 ALCAMQ13740 583 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 PDE1CQ14123 709 aaPredicted RBP8.01□□□□□ -1.13
ATG4D-210ENST00000588972 TOMM20Q15388 145 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 ST3GAL2Q16842 350 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 VMACQ2NL98 169 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 AGAP9Q5VTM2 703 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 ALKAL1Q6UXT8 129 aa8.01□□□□□ -1.13
ATG4D-210ENST00000588972 C4orf50Q6ZRC1 276 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms