RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 OTOP2Q7RTS6 562 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 SCD5Q86SK9 330 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 CUZD1Q86UP6 607 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 CILP2Q8IUL8 1156 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 SCN4BQ8IWT1 228 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 PCSK9Q8NBP7 692 aaKnown RBP14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 TXNDC5Q8NBS9 432 aaKnown RBP14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 ACVR1CQ8NER5 493 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 SCAMP5Q8TAC9 235 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 RHEBL1Q8TAI7 183 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 SPPL2BQ8TCT7 592 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 TSPEARQ8WU66 669 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 NCSTNQ92542 709 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.08□□□□□ -0.168e-7■■■■■ 39.2
NEDD4L-223ENST00000588516 GLT1D1Q96MS3 346 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 HOPXQ9BPY8 73 aaPredicted RBP14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 SPATA16Q9BXB7 569 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 MRPS26Q9BYN8 205 aaKnown RBP14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 SLC24A3Q9HC58 644 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 NT5MQ9NPB1 228 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 SPAG4Q9NPE6 437 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 TMLHEQ9NVH6 421 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 ADA2Q9NZK5 511 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 NDUFAF1Q9Y375 327 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 TRAF6Q9Y4K3 522 aa14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 PRRC2BQ5JSZ5 2229 aaKnown RBP14.08□□□□□ -0.16
NEDD4L-223ENST00000588516 A0A1W2PQH9 124 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 ARHGAP10A1A4S6 786 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 TYW5A2RUC4 315 aaKnown RBP14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 TCAF2A6NFQ2 919 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 EIF4E1BA6NMX2 242 aaKnown RBP14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 MEIS3P2A8K0S8 358 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 A8MT66 165 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 RNASEH1O60930 286 aaKnown RBP14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 ADAMTS4O75173 837 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 ZMPSTE24O75844 475 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 FGF4P08620 206 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 CTSHP09668 335 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 MYOGP15173 224 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 CD52P31358 61 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 THOP1P52888 689 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 POLE2P56282 527 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 ACVR1Q04771 509 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 SULT2A1Q06520 285 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 RING1Q06587 406 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 PDAP1Q13442 181 aaKnown RBP14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 COQ5Q5HYK3 327 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 LRRTM3Q86VH5 581 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 SPATA24Q86W54 205 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 NLRC5Q86WI3 1866 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 BHLHE22Q8NFJ8 381 aaPredicted RBP14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 SPDYE1Q8NFV5 336 aaPredicted RBP14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 OR10T2Q8NGX3 314 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 OR6P1Q8NGX9 317 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 CEP295NLQ96MC4 621 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 FAM193BQ96PV7 902 aaPredicted RBP14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 TCF12Q99081 682 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 CCT7Q99832 543 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 ADAM2Q99965 735 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 HAUS8Q9BT25 410 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 POLR1EQ9GZS1 481 aaKnown RBP14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 MUC13Q9H3R2 512 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 TLR8Q9NR97 1041 aaKnown RBP14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 INTS10Q9NVR2 710 aaKnown RBP14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 GID8Q9NWU2 228 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 SFMBT1Q9UHJ3 866 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 CROTQ9UKG9 612 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 MTF2Q9Y483 593 aaPredicted RBP14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 MTCH2Q9Y6C9 303 aa14.07□□□□□ -0.16
NEDD4L-223ENST00000588516 PRSS51A0A1B0GVH4 220 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 LOC285095A0A1B0GVY8 99 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 DRGXA6NNA5 263 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 ENO4A6NNW6 628 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 PRR33A8MZF0 331 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 CLGNO14967 610 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 RAMP2O60895 175 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 CRTAMO95727 393 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 MOCS2O96007 188 aaPredicted RBP14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 C8BP07358 591 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 XRCC1P18887 633 aaPredicted RBP14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 CD86P42081 329 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 ATP6V0D1P61421 351 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 HERVK_113P63132 956 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 FOXM1Q08050 763 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 DLG1Q12959 904 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 GRIK2Q13002 908 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 CEACAM7Q14002 265 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 POLD3Q15054 466 aaPredicted RBP14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 PCSK7Q16549 785 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 SLC39A12Q504Y0 691 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 AGKQ53H12 422 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 CNSTQ6PJW8 725 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 CD300LGQ6UXG3 332 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 ZNF354CQ86Y25 554 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 C2orf15Q8WU43 125 aaKnown RBP14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 PPP1R13LQ8WUF5 828 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 HLA-CQ95604 372 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 ZUFSPQ96AP4 578 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 TADA1Q96BN2 335 aa14.06□□□□□ -0.16
NEDD4L-223ENST00000588516 DGCR14Q96DF8 476 aaKnown RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms