RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 SDR42E2A6NKP2 422 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 RNASEH2AO75792 299 aaKnown RBP18.3■□□□□ 0.52
H3F3B-206ENST00000587560 CYP2A6P11509 494 aaPredicted RBP18.3■□□□□ 0.52
H3F3B-206ENST00000587560 MGAT1P26572 445 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 HMGCLP35914 325 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 ARL4CP56559 192 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 SESN2P58004 480 aaPredicted RBP18.3■□□□□ 0.52
H3F3B-206ENST00000587560 DHX9Q08211 1270 aaKnown RBP18.3■□□□□ 0.52
H3F3B-206ENST00000587560 DMWDQ09019 674 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 CCDC15Q0P6D6 951 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 ELP6Q0PNE2 266 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 SFSWAPQ12872 951 aaKnown RBP18.3■□□□□ 0.52
H3F3B-206ENST00000587560 TAF1AQ15573 450 aaPredicted RBP18.3■□□□□ 0.52
H3F3B-206ENST00000587560 CNGA3Q16281 694 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 LIPIQ6XZB0 460 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 LYSMD3Q7Z3D4 306 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 IGDCC3Q8IVU1 814 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 RAVER1Q8IY67 606 aaKnown RBP18.3■□□□□ 0.52
H3F3B-206ENST00000587560 NDUFAF2Q8N183 169 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 DNAAF3Q8N9W5 541 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 PTCD2Q8WV60 388 aaKnown RBP18.3■□□□□ 0.52
H3F3B-206ENST00000587560 IFT81Q8WYA0 676 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.3■□□□□ 0.522e-7■■■■■ 64.2
H3F3B-206ENST00000587560 LRRC39Q96DD0 335 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 OMDQ99983 421 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 PARD6BQ9BYG5 372 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 PLAC1Q9HBJ0 212 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 DLL3Q9NYJ7 618 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 BFARQ9NZS9 450 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 TCAF1Q9Y4C2 921 aa18.3■□□□□ 0.52
H3F3B-206ENST00000587560 IGHV1OR15-9A0A0B4J2B8 117 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 PSMD11O00231 422 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 TSPAN6O43657 245 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 ZNF217O75362 1048 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 BANF1O75531 89 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 ACADMP11310 421 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 ZNF30P17039 623 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 ADRA1DP25100 572 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 ACSL1P33121 698 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 TNNT3P45378 269 aaPredicted RBP18.29■□□□□ 0.52
H3F3B-206ENST00000587560 ZNF140P52738 457 aaPredicted RBP18.29■□□□□ 0.52
H3F3B-206ENST00000587560 STC1P52823 247 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 SEMG2Q02383 582 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 PTSQ03393 145 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 ACVR1Q04771 509 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 PCID2Q5JVF3 399 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 LRRC66Q68CR7 880 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 ERAP2Q6P179 960 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 PDIK1LQ8N165 341 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 PEX13Q92968 403 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 TXLNGYQ9BZA5 131 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 SGK2Q9HBY8 427 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 TREX1Q9NSU2 369 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 WSB2Q9NYS7 404 aaPredicted RBP18.29■□□□□ 0.52
H3F3B-206ENST00000587560 IL17CQ9P0M4 197 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 BCCIPQ9P287 314 aaKnown RBP eCLIP18.29■□□□□ 0.52
H3F3B-206ENST00000587560 FBXO4Q9UKT5 387 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 SOX13Q9UN79 622 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 NCKAP1Q9Y2A7 1128 aa18.29■□□□□ 0.52
H3F3B-206ENST00000587560 ASPMQ8IZT6 3477 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 CEP192Q8TEP8 1941 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 AXIN1O15169 862 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 CLDN7O95471 211 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 C1SP09871 688 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 NFKBIAP25963 317 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 OXTRP30559 389 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 CRADDP78560 199 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 MTM1Q13496 603 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 HLTFQ14527 1009 aaKnown RBP eCLIP18.28■□□□□ 0.52
H3F3B-206ENST00000587560 POU6F1Q14863 301 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 FASTKD3Q14CZ7 662 aaKnown RBP18.28■□□□□ 0.52
H3F3B-206ENST00000587560 AGERQ15109 404 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 ELF2Q15723 593 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 TMEM259Q4ZIN3 620 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 DNAJC21Q5F1R6 531 aaKnown RBP18.28■□□□□ 0.52
H3F3B-206ENST00000587560 NEK5Q6P3R8 708 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 TECPR1Q7Z6L1 1165 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 TMEM135Q86UB9 458 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 WDR5BQ86VZ2 330 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 BLOC1S5Q8TDH9 187 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 COQ10AQ96MF6 247 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 ZNF778Q96MU6 729 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 FMO2Q99518 471 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 EBNA1BP2Q99848 306 aaKnown RBP18.28■□□□□ 0.52
H3F3B-206ENST00000587560 PREBQ9HCU5 417 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.28■□□□□ 0.52
H3F3B-206ENST00000587560 NFKBIL1Q9UBC1 381 aaPredicted RBP18.28■□□□□ 0.52
H3F3B-206ENST00000587560 ZFR2Q9UPR6 939 aaKnown RBP18.28■□□□□ 0.52
H3F3B-206ENST00000587560 KCTD3Q9Y597 815 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 ARL5AQ9Y689 179 aa18.28■□□□□ 0.52
H3F3B-206ENST00000587560 FANCMQ8IYD8 2048 aa18.27■□□□□ 0.52
H3F3B-206ENST00000587560 C1orf232A0A0U1RR37 186 aa18.27■□□□□ 0.52
H3F3B-206ENST00000587560 FAM237BA0A1B0GVD1 139 aa18.27■□□□□ 0.52
H3F3B-206ENST00000587560 HEATR9A2RTY3 570 aa18.27■□□□□ 0.52
H3F3B-206ENST00000587560 LAMTOR5O43504 91 aa18.27■□□□□ 0.52
H3F3B-206ENST00000587560 TUBBP07437 444 aa18.27■□□□□ 0.52
H3F3B-206ENST00000587560 FAM153BP0C7A2 387 aa18.27■□□□□ 0.52
H3F3B-206ENST00000587560 XPAP23025 273 aaPredicted RBP18.27■□□□□ 0.52
H3F3B-206ENST00000587560 PXNP49023 591 aaPredicted RBP18.27■□□□□ 0.52
H3F3B-206ENST00000587560 FAM193AP78312 1265 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms