RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 GPR63Q9BZJ6 419 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 TSPYL1Q9H0U9 437 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 PCED1AQ9H1Q7 454 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 EPC1Q9H2F5 836 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 MRM3Q9HC36 420 aaKnown RBP16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 SYBUQ9NX95 663 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 RIMKLBQ9ULI2 386 aa16.98■□□□□ 0.31
PRKCSH-203ENST00000586486 PLXNA2O75051 1894 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 C2orf81A6NN90 581 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 A8MX80 341 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 PCDH8O95206 1070 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 CLDN7O95471 211 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 C1SP09871 688 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 PSMA3P25788 255 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 ZNF140P52738 457 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 RPS21P63220 83 aaKnown RBP16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 PTSQ03393 145 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 DHX9Q08211 1270 aaKnown RBP16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 SLC36A4Q6YBV0 504 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 CEP128Q6ZU80 1094 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 NLRP9Q7RTR0 991 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 WRAP53Q9BUR4 548 aaKnown RBP16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 KIFC1Q9BW19 673 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 NFU1Q9UMS0 254 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 ARL5AQ9Y689 179 aa16.97■□□□□ 0.31
PRKCSH-203ENST00000586486 A0A0U1RQS6 177 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 MAGEB16A2A368 324 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 GALR2O43603 387 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 RNGTTO60942 597 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 TUBBP07437 444 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 C6P13671 934 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 LPOP22079 712 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 CRADDP78560 199 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 SEPT6Q14141 434 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 AGERQ15109 404 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 ANGPT1Q15389 498 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 BBS9Q3SYG4 887 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 HORMAD1Q86X24 394 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 MPP5Q8N3R9 675 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 FAM160A2Q8N612 972 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 COQ10AQ96MF6 247 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 NAT9Q9BTE0 207 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 IL17CQ9P0M4 197 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 SAMD15Q9P1V8 674 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 NFKBIL1Q9UBC1 381 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 MBD1Q9UIS9 605 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 SOX13Q9UN79 622 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 ZFR2Q9UPR6 939 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 TEX264Q9Y6I9 313 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 TRPM6Q9BX84 2022 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 CUL9Q8IWT3 2517 aa16.96■□□□□ 0.31
PRKCSH-203ENST00000586486 TBC1D3DA0A087WVF3 549 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 TBC1D3IA0A087WXS9 549 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 TBC1D3EA0A087X179 549 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 TBC1D3KA0A087X1G2 549 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 FAM237BA0A1B0GVD1 139 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 A0A1W2PQU0 124 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 RGSL1A5PLK6 1076 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 TBC1D3FA6NER0 549 aaPredicted RBP16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 TBC1D3LB9A6J9 549 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 LATO43561 262 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 MMP20O60882 483 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 TBC1D3HP0C7X1 549 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 GM2AP17900 193 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 MCM3P25205 808 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 CCR5P51681 352 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 PPP2CBP62714 309 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 PPP2CAP67775 309 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 PDIA2Q13087 525 aaKnown RBP16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 CCDC38Q502W7 563 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 SEL1L3Q68CR1 1132 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 DENND2CQ68D51 928 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 TBC1D3GQ6DHY5 549 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 TBC1D3CQ6IPX1 549 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 CYP2U1Q7Z449 544 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 HSD11B1LQ7Z5J1 315 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 C11orf74Q86VG3 221 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 CCNJLQ8IV13 435 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 TBC1D3Q8IZP1 549 aaPredicted RBP16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 FRMD1Q8N878 549 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 CADM4Q8NFZ8 388 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 STYXQ8WUJ0 223 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 ASB12Q8WXK4 309 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 STAMBPL1Q96FJ0 436 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 EBNA1BP2Q99848 306 aaKnown RBP16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 WDR83Q9BRX9 315 aaKnown RBP16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 C1QTNF2Q9BXJ5 285 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 KCTD5Q9NXV2 234 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 PKD2L2Q9NZM6 624 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 PKP3Q9Y446 797 aa16.96■□□□□ 0.3
PRKCSH-203ENST00000586486 TM7SF2O76062 418 aa16.95■□□□□ 0.3
PRKCSH-203ENST00000586486 SP9P0CG40 484 aa16.95■□□□□ 0.3
PRKCSH-203ENST00000586486 SPINT3P49223 89 aa16.95■□□□□ 0.3
PRKCSH-203ENST00000586486 DCDC1P59894 354 aa16.95■□□□□ 0.3
PRKCSH-203ENST00000586486 VSNL1P62760 191 aa16.95■□□□□ 0.3
PRKCSH-203ENST00000586486 ACVR1Q04771 509 aa16.95■□□□□ 0.3
PRKCSH-203ENST00000586486 ZNF284Q2VY69 593 aa16.95■□□□□ 0.3
PRKCSH-203ENST00000586486 TSTD2Q5T7W7 516 aa16.95■□□□□ 0.3
PRKCSH-203ENST00000586486 ZDHHC20Q5W0Z9 365 aa16.95■□□□□ 0.3
PRKCSH-203ENST00000586486 KIAA0895LQ68EN5 471 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms