RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ESRP1Q6NXG1 681 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 FBXL19Q6PCT2 694 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 TRMT10BQ6PF06 316 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 PTAR1Q7Z6K3 402 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 KIAA0907Q7Z7F0 614 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 GALNT7Q86SF2 657 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 TBC1D1Q86TI0 1168 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 ADIPOR2Q86V24 386 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 EXOC3L1Q86VI1 746 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 LCA5Q86VQ0 697 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 CAMK1DQ8IU85 385 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 CNTN4Q8IWV2 1026 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 ETFBKMTQ8IXQ9 262 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 CHPFQ8IZ52 775 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 GPATCH11Q8N954 259 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 OR4K2Q8NGD2 314 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 OR4L1Q8NH43 312 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 PPP1R14CQ8TAE6 165 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 RIN3Q8TB24 985 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 FAM45AQ8TCE6 357 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 MGARPQ8TDB4 240 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 CYB5D2Q8WUJ1 264 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 DNASE1L2Q92874 299 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 ULK4Q96C45 1275 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 DNAJC1Q96KC8 554 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 MSLNLQ96KJ4 702 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 FAM161BQ96MY7 647 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 TRIB3Q96RU7 358 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 P2RY13Q9BPV8 354 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 TSSK1BQ9BXA7 367 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 S1PR5Q9H228 398 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 MFSD1Q9H3U5 465 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 C8orf33Q9H7E9 229 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 UBE2ZQ9H832 354 aaPredicted RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 FBRSQ9HAH7 460 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 HPS4Q9NQG7 708 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 TREX1Q9NSU2 369 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 GTSE1Q9NYZ3 720 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 DCDC2Q9UHG0 476 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 CRLS1Q9UJA2 301 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 FBXO10Q9UK96 956 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 GRID1Q9ULK0 1009 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 CLEC4EQ9ULY5 219 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 FNDC3AQ9Y2H6 1198 aaKnown RBP6.2□□□□□ -1.42
LIG3-206ENST00000586058 ARL5AQ9Y689 179 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 COMMD10Q9Y6G5 202 aa6.2□□□□□ -1.42
LIG3-206ENST00000586058 PRRC2BQ5JSZ5 2229 aaKnown RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 CEP192Q8TEP8 1941 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 A0A087X1B8 175 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 GLYATL1P3A0A0U1RQE8 302 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 FAM95CA0A1B0GW59 222 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 MROH6A6NGR9 719 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 UPK3BL1B0FP48 263 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 CFAP99D6REC4 459 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 UPK3BL2E5RIL1 263 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 H3BQ06 376 aaPredicted RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 GOLGA8TH3BQL2 631 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 GOLGA8RI6L899 631 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 TPP1O14773 563 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 CD3EAPO15446 510 aaKnown RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 HTRA2O43464 458 aaPredicted RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 LDB2O43679 373 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 FZD6O60353 706 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 SPAG7O75391 227 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 VPS26AO75436 327 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 LEFTY1O75610 366 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 CD160O95971 181 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 ADH1BP00325 375 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 GOT2P00505 430 aaKnown RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 IL1BP01584 269 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 PRKCGP05129 697 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 PDHA1P08559 390 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 ELFN1P0C7U0 828 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 RALBP11234 206 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 CTPS1P17812 591 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 GCAP28676 217 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 CRABP2P29373 138 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 ALDH3A1P30838 453 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 VIPR1P32241 457 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 MC4RP32245 332 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 HMGCLP35914 325 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 TNFRSF4P43489 277 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 ZNF140P52738 457 aaPredicted RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 POU4F1Q01851 419 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 ACVR1Q04771 509 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 CACNG1Q06432 222 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 GRSF1Q12849 480 aaKnown RBP eCLIP6.19□□□□□ -1.42
LIG3-206ENST00000586058 HTR4Q13639 388 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 USP10Q14694 798 aaKnown RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 QPCTQ16769 361 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 ZNF284Q2VY69 593 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 HNRNPA1L2Q32P51 320 aaKnown RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 CCDC153Q494R4 210 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 TTC31Q49AM3 519 aaPredicted RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 ZNF805Q5CZA5 627 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 UBAP2Q5T6F2 1119 aaKnown RBP6.19□□□□□ -1.42
LIG3-206ENST00000586058 TEDDM1Q5T9Z0 273 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 UGT3A1Q6NUS8 523 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 PARM1Q6UWI2 310 aa6.19□□□□□ -1.42
LIG3-206ENST00000586058 KYAT3Q6YP21 454 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms