RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 BOCQ9BWV1 1114 aa12.39□□□□□ -0.43
SS18-225ENST00000585121 NRSN2Q9GZP1 204 aa12.39□□□□□ -0.43
SS18-225ENST00000585121 CLPBQ9H078 707 aa12.39□□□□□ -0.43
SS18-225ENST00000585121 BRD8Q9H0E9 1235 aa12.39□□□□□ -0.43
SS18-225ENST00000585121 GOLGA6AQ9NYA3 693 aa12.39□□□□□ -0.43
SS18-225ENST00000585121 GULP1Q9UBP9 304 aa12.39□□□□□ -0.43
SS18-225ENST00000585121 GPR34Q9UPC5 381 aa12.39□□□□□ -0.43
SS18-225ENST00000585121 DGKBQ9Y6T7 804 aa12.39□□□□□ -0.43
SS18-225ENST00000585121 ACACAQ13085 2346 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 FREM2Q5SZK8 3169 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 LY6G6EA0A0G2JKS1 128 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 EME2A4GXA9 379 aaPredicted RBP12.38□□□□□ -0.43
SS18-225ENST00000585121 ZNF30P17039 623 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 CTPS1P17812 591 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 COMTP21964 271 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 ETV3P41162 512 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 RPL26P61254 145 aaKnown RBP12.38□□□□□ -0.43
SS18-225ENST00000585121 PPIDQ08752 370 aaKnown RBP12.38□□□□□ -0.43
SS18-225ENST00000585121 SLC10A2Q12908 348 aaPredicted RBP12.38□□□□□ -0.43
SS18-225ENST00000585121 TFDP2Q14188 446 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 SLC9A4Q6AI14 798 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 RAET1GQ6H3X3 334 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 GUSBP11Q6P575 273 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 PLD5Q8N7P1 536 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 WDR48Q8TAF3 677 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 PIH1D2Q8WWB5 315 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 RNF25Q96BH1 459 aaPredicted RBP12.38□□□□□ -0.43
SS18-225ENST00000585121 DTD2Q96FN9 168 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 MRFAP1L1Q96HT8 127 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 LGMNQ99538 433 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 RBSNQ9H1K0 784 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 PNMA8BQ9ULN7 279 aaPredicted RBP12.38□□□□□ -0.43
SS18-225ENST00000585121 PADI4Q9UM07 663 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 RPL26L1Q9UNX3 145 aaKnown RBP12.38□□□□□ -0.43
SS18-225ENST00000585121 CHKBQ9Y259 395 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 PCDHA13Q9Y5I0 950 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 U3KQA8 63 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 DMXL2Q8TDJ6 3036 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 PTPRBP23467 1997 aa12.38□□□□□ -0.43
SS18-225ENST00000585121 A0A0J9YYE9 177 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 TMEM202A6NGA9 273 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 NPIPB15A6NHN6 443 aaPredicted RBP12.37□□□□□ -0.43
SS18-225ENST00000585121 TAF4O00268 1085 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 PSTPIP1O43586 416 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 FZD6O60353 706 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 TRBC1P01850 177 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 HLA-DQB2P05538 268 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 PYGLP06737 847 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 PDHA1P08559 390 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 MYCLP1P12525 358 aaPredicted RBP12.37□□□□□ -0.43
SS18-225ENST00000585121 GM2AP17900 193 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 ZNF75DP51815 510 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 HADHBP55084 474 aaKnown RBP12.37□□□□□ -0.43
SS18-225ENST00000585121 IFI35P80217 286 aaPredicted RBP12.37□□□□□ -0.43
SS18-225ENST00000585121 Q6ZVL8 140 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 HSD11B1LQ7Z5J1 315 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 TAF8Q7Z7C8 310 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 TSPAN33Q86UF1 283 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 SLC35F3Q8IY50 421 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 CBARPQ8N350 705 aaPredicted RBP12.37□□□□□ -0.43
SS18-225ENST00000585121 ARL10Q8N8L6 244 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 OR6C4Q8NGE1 309 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 LRRN4Q8WUT4 740 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 OR1E3Q8WZA6 343 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 PDXPQ96GD0 296 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 PANX2Q96RD6 677 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 RBM15Q96T37 977 aaKnown RBP eCLIP12.37□□□□□ -0.43
SS18-225ENST00000585121 ADGRE3Q9BY15 652 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 PCDH9Q9HC56 1237 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 CYP4F12Q9HCS2 524 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 SEPT10Q9P0V9 454 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 SIRPGQ9P1W8 387 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 RAXQ9Y2V3 346 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.37□□□□□ -0.43
SS18-225ENST00000585121 HYOU1Q9Y4L1 999 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 ALG6Q9Y672 507 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 PLXNB3Q9ULL4 1909 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 APC2O95996 2303 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 WDFY3Q8IZQ1 3526 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 A0A0A6YYK5 440 aaPredicted RBP12.37□□□□□ -0.43
SS18-225ENST00000585121 C3orf70A6NLC5 250 aaPredicted RBP12.37□□□□□ -0.43
SS18-225ENST00000585121 KCNK1O00180 336 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 LHCGRP22888 699 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 TEAD1P28347 426 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 DEKP35659 375 aaKnown RBP12.37□□□□□ -0.43
SS18-225ENST00000585121 CD86P42081 329 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 GPR1P46091 355 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 NR2C2P49116 596 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 DYNLT1P63172 113 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 DPTQ07507 201 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 RTP5Q14D33 572 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 TCEA2Q15560 299 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 CDCP2Q5VXM1 449 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 LRRC66Q68CR7 880 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 CRTC1Q6UUV9 634 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 MFSD7Q6UXD7 560 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 HEATR4Q86WZ0 1026 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 TMTC1Q8IUR5 882 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 NRSN1Q8IZ57 195 aa12.37□□□□□ -0.43
SS18-225ENST00000585121 LPCAT1Q8NF37 534 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms