RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 NFATC4Q14934 902 aa15.74■□□□□ 0.11
SKA2-209ENST00000583976 TMEM52BQ4KMG9 183 aa15.74■□□□□ 0.11
SKA2-209ENST00000583976 RD3Q7Z3Z2 195 aa15.74■□□□□ 0.11
SKA2-209ENST00000583976 CLEC14AQ86T13 490 aa15.74■□□□□ 0.11
SKA2-209ENST00000583976 PLA2G15Q8NCC3 412 aa15.74■□□□□ 0.11
SKA2-209ENST00000583976 WDR36Q8NI36 951 aaKnown RBP15.74■□□□□ 0.11
SKA2-209ENST00000583976 KCNF1Q9H3M0 494 aa15.74■□□□□ 0.11
SKA2-209ENST00000583976 EPB41L5Q9HCM4 733 aa15.74■□□□□ 0.11
SKA2-209ENST00000583976 WDR70Q9NW82 654 aa15.74■□□□□ 0.11
SKA2-209ENST00000583976 DKK3Q9UBP4 350 aa15.74■□□□□ 0.11
SKA2-209ENST00000583976 UBA2Q9UBT2 640 aaPredicted RBP15.74■□□□□ 0.11
SKA2-209ENST00000583976 DOLKQ9UPQ8 538 aa15.74■□□□□ 0.11
SKA2-209ENST00000583976 MFHAS1Q9Y4C4 1052 aa15.74■□□□□ 0.11
SKA2-209ENST00000583976 AHCTF1Q8WYP5 2266 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 CCDC187A0A096LP49 1063 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 A0A1W2PQM1 296 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 H3BRJ5 948 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 NTN3O00634 580 aaPredicted RBP15.73■□□□□ 0.11
SKA2-209ENST00000583976 FGF10O15520 208 aaPredicted RBP15.73■□□□□ 0.11
SKA2-209ENST00000583976 RPLP0P05388 317 aaKnown RBP15.73■□□□□ 0.11
SKA2-209ENST00000583976 ERCC2P18074 760 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 XPAP23025 273 aaPredicted RBP15.73■□□□□ 0.11
SKA2-209ENST00000583976 AMPD1P23109 780 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 RAD51Q06609 339 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 RALGDSQ12967 914 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 LRRC14Q15048 493 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 PARP15Q460N3 678 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 INO80DQ53TQ3 878 aaPredicted RBP15.73■□□□□ 0.11
SKA2-209ENST00000583976 C11orf63Q6NUN7 778 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 ESRP1Q6NXG1 681 aaKnown RBP15.73■□□□□ 0.11
SKA2-209ENST00000583976 ENPP7Q6UWV6 458 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 POLNQ7Z5Q5 900 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 RHOT1Q8IXI2 618 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 CASKIN2Q8WXE0 1202 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 RAPGEF5Q92565 580 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 GLMNQ92990 594 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 FUBP1Q96AE4 644 aaKnown RBP15.73■□□□□ 0.11
SKA2-209ENST00000583976 CSPG4P5Q96PW8 444 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 CPEB1Q9BZB8 566 aaKnown RBP15.73■□□□□ 0.11
SKA2-209ENST00000583976 DPH1Q9BZG8 443 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 RETREG1Q9H6L5 497 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 LRRC19Q9H756 370 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 FGF22Q9HCT0 170 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 LZTFL1Q9NQ48 299 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 KLQ9UEF7 1012 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 SSUH2Q9Y2M2 353 aa15.73■□□□□ 0.11
SKA2-209ENST00000583976 GRID2IPA4D2P6 1211 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 K7ENP7 123 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 KRT86O43790 486 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 PALMO75781 387 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 RASGRP1O95267 797 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 KRT1P04264 644 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 ITGA2BP08514 1039 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 HTR7P34969 479 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 HCAR3P49019 387 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 LIG3P49916 1009 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 ARSEP51690 589 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 CCL7P80098 99 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 DPYSL3Q14195 570 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 INPP5AQ14642 412 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 IFI16Q16666 785 aaKnown RBP15.72■□□□□ 0.11
SKA2-209ENST00000583976 UGP2Q16851 508 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 ODF2Q5BJF6 829 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 INO80CQ6PI98 192 aaPredicted RBP15.72■□□□□ 0.11
SKA2-209ENST00000583976 CAMK1DQ8IU85 385 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 UMODL1-AS1Q8N2C9 162 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 PELI3Q8N2H9 469 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 FSTL5Q8N475 847 aaPredicted RBP15.72■□□□□ 0.11
SKA2-209ENST00000583976 ARL14Q8N4G2 192 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 KIAA1524Q8TCG1 905 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 SNRNP27Q8WVK2 155 aaKnown RBP15.72■□□□□ 0.11
SKA2-209ENST00000583976 OR1E3Q8WZA6 343 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 RNF25Q96BH1 459 aaPredicted RBP15.72■□□□□ 0.11
SKA2-209ENST00000583976 CALR3Q96L12 384 aaKnown RBP15.72■□□□□ 0.11
SKA2-209ENST00000583976 TSGA10Q9BZW7 698 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 MRPL40Q9NQ50 206 aaKnown RBP15.72■□□□□ 0.11
SKA2-209ENST00000583976 GPR34Q9UPC5 381 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 ATP8A1Q9Y2Q0 1164 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 PPP2R2CQ9Y2T4 447 aa15.72■□□□□ 0.11
SKA2-209ENST00000583976 MYO18BQ8IUG5 2567 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 LRRD1A4D1F6 860 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 WASH4PA8MWX3 477 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 RIOK3O14730 519 aaKnown RBP15.71■□□□□ 0.11
SKA2-209ENST00000583976 PLD2O14939 933 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 CTSEP14091 401 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 KDELR1P24390 212 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 IL4RP24394 825 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 ZNF135P52742 658 aaPredicted RBP15.71■□□□□ 0.11
SKA2-209ENST00000583976 YBEYP58557 167 aaPredicted RBP15.71■□□□□ 0.11
SKA2-209ENST00000583976 SRP54P61011 504 aaKnown RBP15.71■□□□□ 0.11
SKA2-209ENST00000583976 ELP6Q0PNE2 266 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 DPYSQ14117 519 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 PDK2Q15119 407 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 ELOCQ15369 112 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 TGIF1Q15583 401 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 CFAP58Q5T655 872 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 LRRC38Q5VT99 294 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 ARHGAP36Q6ZRI8 547 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 MAP7D3Q8IWC1 876 aa15.71■□□□□ 0.11
SKA2-209ENST00000583976 NPWQ8N729 165 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms