RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 FBXO39Q8N4B4 442 aa20.62■□□□□ 0.89
SRSF1-206ENST00000583741 FNIP1Q8TF40 1166 aa20.62■□□□□ 0.89
SRSF1-206ENST00000583741 TBC1D31Q96DN5 1066 aa20.62■□□□□ 0.89
SRSF1-206ENST00000583741 GFM1Q96RP9 751 aaKnown RBP20.62■□□□□ 0.89
SRSF1-206ENST00000583741 KLC2Q9H0B6 622 aa20.62■□□□□ 0.89
SRSF1-206ENST00000583741 RETREG1Q9H6L5 497 aa20.62■□□□□ 0.89
SRSF1-206ENST00000583741 AMFRQ9UKV5 643 aa20.62■□□□□ 0.89
SRSF1-206ENST00000583741 ALG6Q9Y672 507 aa20.62■□□□□ 0.89
SRSF1-206ENST00000583741 PROSCO94903 275 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 WISP1O95388 367 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 RPLP0P05388 317 aaKnown RBP20.61■□□□□ 0.89
SRSF1-206ENST00000583741 SDC4P31431 198 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 OGDHQ02218 1023 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 EIF3IQ13347 325 aaKnown RBP20.61■□□□□ 0.89
SRSF1-206ENST00000583741 WSCD2Q2TBF2 565 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 LINC00303Q3SY05 128 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 PRICKLE2Q7Z3G6 844 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 NT5DC3Q86UY8 548 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 JAMLQ86YT9 394 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 CPEB1Q9BZB8 566 aaKnown RBP20.61■□□□□ 0.89
SRSF1-206ENST00000583741 DKK3Q9UBP4 350 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 MFHAS1Q9Y4C4 1052 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 HYOU1Q9Y4L1 999 aa20.61■□□□□ 0.89
SRSF1-206ENST00000583741 C2CD4BA6NLJ0 364 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 INSIG1O15503 277 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 IGSF6O95976 241 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 ATP1A1P05023 1023 aaKnown RBP20.6■□□□□ 0.89
SRSF1-206ENST00000583741 ALPIP09923 528 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 CTSEP14091 401 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 GPD1P21695 349 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 COMTP21964 271 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 PSMA2P25787 234 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 MAN1A1P33908 653 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 PEX5P50542 639 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 BLKP51451 505 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 HDAC4P56524 1084 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 NFATC3Q12968 1075 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 PIGHQ14442 188 aaPredicted RBP20.6■□□□□ 0.89
SRSF1-206ENST00000583741 LRRC14Q15048 493 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 TMEM52BQ4KMG9 183 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 MEI1Q5TIA1 1274 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 LVRNQ6Q4G3 990 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 RD3Q7Z3Z2 195 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 ZNF354CQ86Y25 554 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 SCG3Q8WXD2 468 aaKnown RBP20.6■□□□□ 0.89
SRSF1-206ENST00000583741 EXOC2Q96KP1 924 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 ACSL6Q9UKU0 697 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 GPR34Q9UPC5 381 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 OR1A2Q9Y585 309 aa20.6■□□□□ 0.89
SRSF1-206ENST00000583741 ZSCAN5CA6NGD5 496 aaPredicted RBP20.59■□□□□ 0.89
SRSF1-206ENST00000583741 SPOPO43791 374 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 RASGRP1O95267 797 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 PIGNO95427 931 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 SLC1A1P43005 524 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 PTPN9P43378 593 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 INHBCP55103 352 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 RHOAP61586 193 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 NFATC4Q14934 902 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 ENPP7Q6UWV6 458 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 NIPA2Q8N8Q9 360 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 CENPIQ92674 756 aaPredicted RBP20.59■□□□□ 0.89
SRSF1-206ENST00000583741 PDXPQ96GD0 296 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 PACSIN2Q9UNF0 486 aaPredicted RBP20.59■□□□□ 0.89
SRSF1-206ENST00000583741 FLNCQ14315 2725 aa20.59■□□□□ 0.89
SRSF1-206ENST00000583741 CCKBRP32239 447 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 ZNF143P52747 638 aaPredicted RBP20.58■□□□□ 0.89
SRSF1-206ENST00000583741 SRP54P61011 504 aaKnown RBP20.58■□□□□ 0.89
SRSF1-206ENST00000583741 RAD51Q06609 339 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 INPP5AQ14642 412 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 INO80DQ53TQ3 878 aaPredicted RBP20.58■□□□□ 0.89
SRSF1-206ENST00000583741 STRADAQ7RTN6 431 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 PYROXD2Q8N2H3 581 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 FAM172AQ8WUF8 416 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 UBE2Q2Q8WVN8 375 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 TLR10Q9BXR5 811 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 TRIM4Q9C037 500 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 STRADBQ9C0K7 418 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 LRRN3Q9H3W5 708 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 LHX3Q9UBR4 397 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 PISDQ9UG56 409 aa20.58■□□□□ 0.89
SRSF1-206ENST00000583741 AGRPO00253 132 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 DESP17661 470 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 RPS6KA1Q15418 735 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 USP53Q70EK8 1073 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 GKN2Q86XP6 184 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 CPNE8Q86YQ8 564 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 SFTPA2Q8IWL1 248 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 RTL3Q8N8U3 475 aaKnown RBP20.57■□□□□ 0.88
SRSF1-206ENST00000583741 CASKIN2Q8WXE0 1202 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 EXTL1Q92935 676 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 NTAN1Q96AB6 310 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 SGF29Q96ES7 293 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 HMCESQ96FZ2 354 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 CNPY3Q9BT09 278 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 APOOQ9BUR5 198 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 PCDH12Q9NPG4 1184 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 KLQ9UEF7 1012 aa20.57■□□□□ 0.88
SRSF1-206ENST00000583741 ARHGEF17Q96PE2 2063 aaPredicted RBP20.57■□□□□ 0.88
SRSF1-206ENST00000583741 MIF4GDA9UHW6 222 aaKnown RBP20.56■□□□□ 0.88
SRSF1-206ENST00000583741 ITIH1P19827 911 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms