RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 PPP2R5BQ15173 497 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 HIST2H2ACQ16777 129 aaPredicted RBP3.99□□□□□ -1.77
COPS3-217ENST00000583160 TCTN1Q2MV58 587 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 EIF2S3LQ2VIR3 472 aaKnown RBP3.99□□□□□ -1.77
COPS3-217ENST00000583160 CEP85LQ5SZL2 805 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 ADAM5Q6NVV9 412 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 FBXL22Q6P050 247 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 SLC36A4Q6YBV0 504 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 LINGO2Q7L985 606 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 SLC26A9Q7LBE3 791 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 SLC35F3Q8IY50 421 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 CIARTQ8N365 385 aaPredicted RBP3.99□□□□□ -1.77
COPS3-217ENST00000583160 SLC20A1Q8WUM9 679 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 HERVK_113Q902F9 699 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 CDCA5Q96FF9 252 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 TRMT61BQ9BVS5 477 aaKnown RBP3.99□□□□□ -1.77
COPS3-217ENST00000583160 KCNN2Q9H2S1 579 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 C20orf141Q9NUB4 165 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 BEX4Q9NWD9 120 aaPredicted RBP3.99□□□□□ -1.77
COPS3-217ENST00000583160 HCN3Q9P1Z3 774 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 HSPB7Q9UBY9 170 aa3.99□□□□□ -1.77
COPS3-217ENST00000583160 FBXO9Q9UK97 447 aaPredicted RBP3.99□□□□□ -1.77
COPS3-217ENST00000583160 A0A1W2PS18 150 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 ASPDHA6ND91 283 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 GAGE10A6NGK3 116 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 PAK4O96013 591 aaPredicted RBP3.98□□□□□ -1.77
COPS3-217ENST00000583160 TFP02787 698 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 HLA-DOBP13765 273 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 MARK3P27448 753 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 EFNA5P52803 228 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 CRIP2P52943 208 aaPredicted RBP3.98□□□□□ -1.77
COPS3-217ENST00000583160 RAD23BP54727 409 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 C2orf68Q2NKX9 166 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 KCNT1Q5JUK3 1230 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 RGMBQ6NW40 437 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 DSG4Q86SJ6 1040 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 TMEM219Q86XT9 240 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 TDRPQ86YL5 185 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 WDR63Q8IWG1 891 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 ZBTB2Q8N680 514 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 PPM1EQ8WY54 764 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 LBHD1Q9BQE6 289 aaPredicted RBP3.98□□□□□ -1.77
COPS3-217ENST00000583160 CSTL1Q9H114 145 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 FBRSL1Q9HCM7 1045 aaKnown RBP3.98□□□□□ -1.77
COPS3-217ENST00000583160 ZNF334Q9HCZ1 680 aaPredicted RBP3.98□□□□□ -1.77
COPS3-217ENST00000583160 ABCF3Q9NUQ8 709 aa3.98□□□□□ -1.77
COPS3-217ENST00000583160 RALYQ9UKM9 306 aaKnown RBP3.98□□□□□ -1.77
COPS3-217ENST00000583160 TMEM202A6NGA9 273 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 EIF3FO00303 357 aaPredicted RBP3.97□□□□□ -1.77
COPS3-217ENST00000583160 SLC22A3O75751 556 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 CFC1BP0CG36 223 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 CFC1P0CG37 223 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 S1PR1P21453 382 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 METAP2P50579 478 aaKnown RBP eCLIP3.97□□□□□ -1.77
COPS3-217ENST00000583160 CLCNKAP51800 687 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 RNPS1Q15287 305 aaKnown RBP3.97□□□□□ -1.77
COPS3-217ENST00000583160 SLC45A4Q5BKX6 768 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 TXNDC8Q6A555 127 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 C19orf48Q6RUI8 117 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 GFRALQ6UXV0 394 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 ANKRD18AQ8IVF6 992 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 KLHDC8BQ8IXV7 354 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.97□□□□□ -1.77
COPS3-217ENST00000583160 ZNF34Q8IZ26 560 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 DMBX1Q8NFW5 382 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 BBS10Q8TAM1 723 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 DUSP19Q8WTR2 217 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 TMEM255BQ8WV15 326 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 ABTB1Q969K4 478 aaPredicted RBP3.97□□□□□ -1.77
COPS3-217ENST00000583160 FBXO17Q96EF6 278 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 PPCSQ9HAB8 311 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 GPR108Q9NPR9 543 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 KLHL1Q9NR64 748 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 TMEM30AQ9NV96 361 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 PADI1Q9ULC6 663 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 GAB2Q9UQC2 676 aa3.97□□□□□ -1.77
COPS3-217ENST00000583160 NOTCH3Q9UM47 2321 aa3.96□□□□□ -1.77
COPS3-217ENST00000583160 CAPN9O14815 690 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 PEX14O75381 377 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 IFIT1P09914 478 aaKnown RBP3.96□□□□□ -1.78
COPS3-217ENST00000583160 IRF1P10914 325 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 DDX5P17844 614 aaKnown RBP3.96□□□□□ -1.78
COPS3-217ENST00000583160 MAOAP21397 527 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 RRM1P23921 792 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 FMO5P49326 533 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 HNRNPH2P55795 449 aaKnown RBP3.96□□□□□ -1.78
COPS3-217ENST00000583160 UFM1P61960 85 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 KRT24Q2M2I5 525 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 METTL2BQ6P1Q9 378 aaKnown RBP3.96□□□□□ -1.78
COPS3-217ENST00000583160 KCTD18Q6PI47 426 aaPredicted RBP3.96□□□□□ -1.78
COPS3-217ENST00000583160 LCTLQ6UWM7 567 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 RRM2BQ7LG56 351 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 KMT5CQ86Y97 462 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 SPATA6LQ8N4H0 392 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 METTL27Q8N6F8 245 aaPredicted RBP3.96□□□□□ -1.78
COPS3-217ENST00000583160 HUS1BQ8NHY5 278 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 WBP1Q96G27 269 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 METTL2AQ96IZ6 378 aaKnown RBP3.96□□□□□ -1.78
COPS3-217ENST00000583160 DUX3Q96PT4 197 aa3.96□□□□□ -1.78
COPS3-217ENST00000583160 GPR63Q9BZJ6 419 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms